LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso6g0627	ATGTCCATGTCATTGTCATCTCTAGTTAGAAGACGCTCAAGCGACGAAATAACCAACTCGGCCTCGGTTTCCAGTAGCCTCTTTCCAGCATTTGGCACCACCATCTTTGATGTTGAAGGTTACTCGAAGTCGAACCTAAGAAAATATGTCATTGCTCCCTATGACCGTAGATATCAATTGTGGCAAACGTTCCTTGCGGCATTGGTAGTGTACTCTGCATGGGCATCTCCATTCGAGCTAGCTTTCCGGGAACTGTACGTCAAAAAGTTACACTTCACCATGGATATAGCCTCCACTGTGCCATTTGAGCAGATACATCAAATTCTGACGGGCAAACCAACCAAAAGCGAGGTCTTTGGTTTCCTAATTATGCTTAGACTATGGCGATTGAGGCGTGTTAGCGAACTCTTCGCAAGATTCAATCAAGTAAGGTTCGTTCATGCTTCCCATTTCGTTGGTTCATCACAGGTGACGCTATTTGCAGTGCACTTCGCAGGCTGCATGTATTTTTGGTTGGCTGTCCAACTCAAAACACCCAAAAACACGTGGATCGGGAACAAAACAGAGGATTTTAATGATTTGAGCGTCGGGTTGGGTTACACTTATTCCATGTACTGGTCTGTTGCAACCCTTACTACTGTTGGCTATGGAGATTTCTATGCAGTGAATTTAACAGAGAAGCTTTTCAGTACTTTATACATGCTGTTTAACATCGGCCTCACTTCATATATAATCGGAAACATGACAAATCTGTTAGTTCATAGCTCTGTCGGAACATTTGCAATGGTGTCAGAAACGAAAGCAGAATACTACCCATCTAAGGTTGACATTATCTTGCAAAATGAGATGTCAACATATTTCTACATTTTGGTATCCGGATCACTGGATGTGTTGATGTACAAGAATGGGTCCGAACAGGTAAGATGA	927	0.4283	MSMSLSSLVRRRSSDEITNSASVSSSLFPAFGTTIFDVEGYSKSNLRKYVIAPYDRRYQLWQTFLAALVVYSAWASPFELAFRELYVKKLHFTMDIASTVPFEQIHQILTGKPTKSEVFGFLIMLRLWRLRRVSELFARFNQVRFVHASHFVGSSQVTLFAVHFAGCMYFWLAVQLKTPKNTWIGNKTEDFNDLSVGLGYTYSMYWSVATLTTVGYGDFYAVNLTEKLFSTLYMLFNIGLTSYIIGNMTNLLVHSSVGTFAMVSETKAEYYPSKVDIILQNEMSTYFYILVSGSLDVLMYKNGSEQVR*	309

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso6g0627	308	SUPERFAMILY	cAMP-binding domain-like	262	307	IPR018490	-
	Gso6g0627	308	SUPERFAMILY	Voltage-gated potassium channels	53	252	-	-
	Gso6g0627	308	Pfam	Ion transport protein	70	252	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Gso6g0627	308	PANTHER	POTASSIUM CHANNEL KAT3	86	262	-	-
	Gso6g0627	308	PANTHER	POTASSIUM CHANNEL KAT3	24	84	-	-
	Gso6g0627	308	PANTHER	POTASSIUM CHANNEL KAT3	262	299	-	-
	Gso6g0627	308	PANTHER	POTASSIUM CHANNEL AKT1	86	262	IPR045319	GO:0005249\|GO:0006813
	Gso6g0627	308	PANTHER	POTASSIUM CHANNEL AKT1	24	84	IPR045319	GO:0005249\|GO:0006813
	Gso6g0627	308	PANTHER	POTASSIUM CHANNEL AKT1	262	299	IPR045319	GO:0005249\|GO:0006813
	Gso6g0627	308	Gene3D	-	44	254	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso6g0627	Gso-Chr6	5806758	5810003	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso6g0627	262	307	Ion Channels	AT4G32650	54.348	3.00e-10	59.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso6g0627	K21867		-	gsj:114414198	607.831

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