Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0627 ATGTCCATGTCATTGTCATCTCTAGTTAGAAGACGCTCAAGCGACGAAATAACCAACTCGGCCTCGGTTTCCAGTAGCCTCTTTCCAGCATTTGGCACCACCATCTTTGATGTTGAAGGTTACTCGAAGTCGAACCTAAGAAAATATGTCATTGCTCCCTATGACCGTAGATATCAATTGTGGCAAACGTTCCTTGCGGCATTGGTAGTGTACTCTGCATGGGCATCTCCATTCGAGCTAGCTTTCCGGGAACTGTACGTCAAAAAGTTACACTTCACCATGGATATAGCCTCCACTGTGCCATTTGAGCAGATACATCAAATTCTGACGGGCAAACCAACCAAAAGCGAGGTCTTTGGTTTCCTAATTATGCTTAGACTATGGCGATTGAGGCGTGTTAGCGAACTCTTCGCAAGATTCAATCAAGTAAGGTTCGTTCATGCTTCCCATTTCGTTGGTTCATCACAGGTGACGCTATTTGCAGTGCACTTCGCAGGCTGCATGTATTTTTGGTTGGCTGTCCAACTCAAAACACCCAAAAACACGTGGATCGGGAACAAAACAGAGGATTTTAATGATTTGAGCGTCGGGTTGGGTTACACTTATTCCATGTACTGGTCTGTTGCAACCCTTACTACTGTTGGCTATGGAGATTTCTATGCAGTGAATTTAACAGAGAAGCTTTTCAGTACTTTATACATGCTGTTTAACATCGGCCTCACTTCATATATAATCGGAAACATGACAAATCTGTTAGTTCATAGCTCTGTCGGAACATTTGCAATGGTGTCAGAAACGAAAGCAGAATACTACCCATCTAAGGTTGACATTATCTTGCAAAATGAGATGTCAACATATTTCTACATTTTGGTATCCGGATCACTGGATGTGTTGATGTACAAGAATGGGTCCGAACAGGTAAGATGA 927 0.4283 MSMSLSSLVRRRSSDEITNSASVSSSLFPAFGTTIFDVEGYSKSNLRKYVIAPYDRRYQLWQTFLAALVVYSAWASPFELAFRELYVKKLHFTMDIASTVPFEQIHQILTGKPTKSEVFGFLIMLRLWRLRRVSELFARFNQVRFVHASHFVGSSQVTLFAVHFAGCMYFWLAVQLKTPKNTWIGNKTEDFNDLSVGLGYTYSMYWSVATLTTVGYGDFYAVNLTEKLFSTLYMLFNIGLTSYIIGNMTNLLVHSSVGTFAMVSETKAEYYPSKVDIILQNEMSTYFYILVSGSLDVLMYKNGSEQVR* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0627 308 SUPERFAMILY cAMP-binding domain-like 262 307 IPR018490 -
Gso6g0627 308 SUPERFAMILY Voltage-gated potassium channels 53 252 - -
Gso6g0627 308 Pfam Ion transport protein 70 252 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso6g0627 308 PANTHER POTASSIUM CHANNEL KAT3 86 262 - -
Gso6g0627 308 PANTHER POTASSIUM CHANNEL KAT3 24 84 - -
Gso6g0627 308 PANTHER POTASSIUM CHANNEL KAT3 262 299 - -
Gso6g0627 308 PANTHER POTASSIUM CHANNEL AKT1 86 262 IPR045319 GO:0005249|GO:0006813
Gso6g0627 308 PANTHER POTASSIUM CHANNEL AKT1 24 84 IPR045319 GO:0005249|GO:0006813
Gso6g0627 308 PANTHER POTASSIUM CHANNEL AKT1 262 299 IPR045319 GO:0005249|GO:0006813
Gso6g0627 308 Gene3D - 44 254 - -
Gso6g0627 308 ProSiteProfiles cAMP/cGMP binding motif profile. 262 308 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0627 Gso-Chr6 5806758 5810003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0627 262 307 Ion Channels AT4G32650 54.348 3.00e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0627 K21867 - gsj:114414198 607.831