Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0626 ATGGCAGGAGAAATAGGCGTGATGTTTAATATTCCACAACCTTTTACAGTGAGAAGTAGAGGGCTCTCCCAGGTCAAACGAATCAATCATCGTCATTTCAAGCATATGGTGCAACCATTTAGTGATGATGTGAAGGCAATCAACTACAACTTTATTAAGTATTTTAAGGGCCTCAAAGGCAAGGTGCTAGAAGAAATATCATATATAACAGAATTGATGGGTGACCTTCATGATGAGCATTTAATGCAAAATGTGGGTACAGACGATGAAGTTTCAAGATATCAAGAAGCTTCATATAAAGAAGGAAGAAAAGGAAATTCCAAACCACTGTCAAGTCCAGTCCCCATTAGAGTTAAAATCCACGGACACCATCCCAATGAACACAAAGTGGGAAACGAAACAACACCAAAGATCATACTTCTCCCAAATTCGGTAGAAGATCTTTTCAGTGTTGCAGAGAAAAAATTTGGAAACAGAGGAAGCAAAATTCTTATGGCTGACGGCTCAGAGGTAGAAGAATTAAGCGCAATAAGGGAGAATGATAAGTTATATATCCTCTAA 561 0.3832 MAGEIGVMFNIPQPFTVRSRGLSQVKRINHRHFKHMVQPFSDDVKAINYNFIKYFKGLKGKVLEEISYITELMGDLHDEHLMQNVGTDDEVSRYQEASYKEGRKGNSKPLSSPVPIRVKIHGHHPNEHKVGNETTPKIILLPNSVEDLFSVAEKKFGNRGSKILMADGSEVEELSAIRENDKLYIL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0626 186 Pfam KHA, dimerisation domain of potassium ion channel 117 185 IPR021789 -
Gso6g0626 186 SUPERFAMILY cAMP-binding domain-like 2 51 IPR018490 -
Gso6g0626 186 ProSiteProfiles KHA domain profile. 117 186 IPR021789 -
Gso6g0626 186 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 1 185 - -
Gso6g0626 186 ProSiteProfiles cAMP/cGMP binding motif profile. 1 54 IPR000595 -
Gso6g0626 186 PANTHER POTASSIUM CHANNEL AKT1 1 185 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0626 Gso-Chr6 5803464 5806141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0626 1 186 Ion Channels AT4G32650 44.724 1.40e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0626 K21867 - gmx:102660627 377.096