Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0614 ATGGGTTTGGATTACTATAATGTGTTGAATGTTAACAGAAATGCTACAGAGGATGATCTAAAAAAAGCGTATAGAAAGTTGGCCATGAAATGGCACCCTGACAAGAACCCCACAAACAAAAAAGAAGCTGAAGCCAATTTCAAAGAGATCTCTGAGGCATACGAGGTACTGAGCGATCCACAGAAGAGGGTGGTTTATGATCAGGATGGAGAGGAAGGGCTGAAAGATAGGCCACCACCAGGTAATGAATCAGCATCAAGTGGGTTTAATCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGGTCATCTGGGCCAGGAAGGTCCAAGAGGTTCCCATCTGATGGAGGTGGATTCAGTGCAACTGACAATAATTTCCGAACCTATAGTACAGGACGGGCGAATATGCCAAAGAAGCCACTACCTGTGGAGACCAAACTAGCTTGTAGTTTGGCGGAGTTATACTCTGGATCTACCAGGAAAATGAAGATCTCAAGGAGTGTCGTGGATGTTAACGGACAGGCAATACCAGAGACCGAGATACTAACCATTGAGGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACATTCCCAGACAAAGGGAATCAGCAACCAAATCAACTGGCAGCAGACCTTGTGTTCGTGATTGATGAGAAGCCTCATGATTTGTTCGATAGAGATGGCAATGACCTCATTGTGAGCAAAAGGGTGTCACTGGCAGAGGCCATTGGAGGAACCACAATAAATCTCACCACACTCGATGGACGCAGTTTGAGTATTCCTGTGAGTGACATAGTGAGCCCTGGTTATGAGATGATTGTTGCAAATGAAGGGATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATTTGAGGATCAAATTTGATGTGAAGTTTCCAACAAGGTTGACACATGAGCAACGAGCAGGACTCAAACGAGCATTGGGAAGTTGA 981 0.4495 MGLDYYNVLNVNRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKEISEAYEVLSDPQKRVVYDQDGEEGLKDRPPPGNESASSGFNPRNAEDIFAEFFGSSPFGFGSSGPGRSKRFPSDGGGFSATDNNFRTYSTGRANMPKKPLPVETKLACSLAELYSGSTRKMKISRSVVDVNGQAIPETEILTIEVKPGWKKGTKITFPDKGNQQPNQLAADLVFVIDEKPHDLFDRDGNDLIVSKRVSLAEAIGGTTINLTTLDGRSLSIPVSDIVSPGYEMIVANEGMPITKEPGHRGDLRIKFDVKFPTRLTHEQRAGLKRALGS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0614 326 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 325 - -
Gso6g0614 326 MobiDBLite consensus disorder prediction 112 145 - -
Gso6g0614 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 233 318 IPR008971 GO:0006457|GO:0051082
Gso6g0614 326 SUPERFAMILY Chaperone J-domain 4 111 IPR036869 -
Gso6g0614 326 CDD DnaJ 4 59 IPR001623 -
Gso6g0614 326 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gso6g0614 326 Gene3D - 150 228 - -
Gso6g0614 326 SMART dnaj_3 3 62 IPR001623 -
Gso6g0614 326 Gene3D - 229 325 - -
Gso6g0614 326 Gene3D DnaJ domain 3 112 IPR036869 -
Gso6g0614 326 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gso6g0614 326 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Gso6g0614 326 Pfam DnaJ C terminal domain 151 309 IPR002939 -
Gso6g0614 326 MobiDBLite consensus disorder prediction 126 140 - -
Gso6g0614 326 MobiDBLite consensus disorder prediction 69 90 - -
Gso6g0614 326 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gso6g0614 326 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gso6g0614 326 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gso6g0614 326 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gso6g0614 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 146 241 IPR008971 GO:0006457|GO:0051082
Gso6g0614 326 Pfam DnaJ domain 4 67 IPR001623 -
Gso6g0614 326 CDD DnaJ_C 151 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0614 Gso-Chr6 5703795 5706620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0614 5 67 C2H2 Transcription Factor Family AT1G74250 41.791 1.59e-10 60.1