Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0608 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACCAACAACACTTCAAACCAGCAATTGGTACTCCATGACTTTCTGGGTATGAGGCCCGCCGCCGATTCCCCCAAAACCGCCGATGTCAGGTTACCGGAGCCTTCGGCCTCCGCCTCTTCCACCGGAGGACGCGGCCCCTTCTCCGCCACCTCCGACATCGCTTCCGAAAAACAGGTAGGAAATCATCTCGAGGGAGTTCCATTCTATGGCCCGAGGAGTGATTTTTCTGGCACTGAGATAAGCAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCCAGAGATGCCTTCCAATTGGTCCCTGATTCCTTTCAAAACTCACATTTGATGAAGGTTCTCCGGAATGCAGCTGGAGGAGAAAGGCCTAGAAGGCCCAATGATGATGCAGTGTTACTTGGTATGCAGTCAATGAAGCCATCTTCTTCTCAGATATTTCAGCCTCCCACCAGCACTAAGATTGATGCCAATAAATGGGAACGGTCTATTCTCATGAATGTTGGCCCTTCCATGCAGCATCCACCGCGTGGGGTGCAATTGGCACCTTTTGTGCACCAAATGGCTTCAAGCAAGATTAGGGATACCAATGCTGGCCCTTCATTCATTTCTCAGTCAGCTGCTGATGAAGGTTCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTGCAGCTGCTACAGCCACTGAGAAAAGTATTCCATCTGCTGTGATGCTTGGTGGCAGCAGGCCAAAGCCTGGAACTAATGTAGTAGAATCATCCACACATCCAAGTCAACATGGGCTAACTTCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTGGCTGGGTCAAATGGAGGATCTTGGTCCACTGCATTCTCGCCTAAATCTGCTGTAAAGATGGTTAATGATGGTATCTTGCATAGCGGAGAAAATGAAACAGGTGTAGTTAGTAATGCAGCATTCCCACAGGAGCTTCATGGGAAATTGTCTATTACTGGCAGTTCTAGCCATGCCATTGGGCTTGGTGATCGAGTAACTACTCCAGCGGGGAAACACCATGGAAACGTTTTTGCGAAAGATACAAGAAATCCGGTCCAACCACCAGATCCCAGTTCTGAAGACAAAAGAGCACAGTGA 1239 0.4826 MAVLLRMAQPHNGNTNNTSNQQLVLHDFLGMRPAADSPKTADVRLPEPSASASSTGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDFSGTEISNRLVGSKRSNSDSTFMGSSRDAFQLVPDSFQNSHLMKVLRNAAGGERPRRPNDDAVLLGMQSMKPSSSQIFQPPTSTKIDANKWERSILMNVGPSMQHPPRGVQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSAAATATEKSIPSAVMLGGSRPKPGTNVVESSTHPSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGILHSGENETGVVSNAAFPQELHGKLSITGSSSHAIGLGDRVTTPAGKHHGNVFAKDTRNPVQPPDPSSEDKRAQ* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0608 412 MobiDBLite consensus disorder prediction 267 283 - -
Gso6g0608 412 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 411 IPR040390 -
Gso6g0608 412 PANTHER PROTEIN TIFY 8 52 411 - -
Gso6g0608 412 MobiDBLite consensus disorder prediction 35 64 - -
Gso6g0608 412 Pfam tify domain 284 316 IPR010399 -
Gso6g0608 412 MobiDBLite consensus disorder prediction 375 412 - -
Gso6g0608 412 MobiDBLite consensus disorder prediction 47 64 - -
Gso6g0608 412 SMART tify_2 282 317 IPR010399 -
Gso6g0608 412 ProSiteProfiles Tify domain profile. 282 317 IPR010399 -
Gso6g0608 412 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0608 Gso-Chr6 5653424 5660207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0608 18 315 Tify Gene Family AT4G32570 41.667 4.56e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso6g0608 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0608 - - gmx:100807222 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0610 4 5903856 5910680 Gso6g0608 6 5653424 5660207 GST