Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0602 ATGGAGGAGATTGAAGGGGTGAATTGTTGTAGTGAAAGTGAAAGTAGGAGCTCCAGTGTGACTCGACCTCCCAATCCCAACCCACCTTCGTATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTCATGAACACGAAGTTGTCTGATGTATCTGCTGAGCCGGAGCATGTAACTGAAGATTGTCAGTCTGATTTCTTTCCAATGCTTCGTTCTGGAGCTTGTACTGATATTGGATTCCGGTCAAATATGGAAGATGCATATGTTTGTGTTGACAATTTTATGGAGGATTATGGACTCAAGAACCATATAGACGGACCCAGTGCTTTCTATGGGGTATTTGATGGACATGGGGGAAAGCATGCTGCTGACTTTGCTTGTCTTCATCTGCCAAAGTTCATTGTTGATGACAAAGATTTCCCTAGAGATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAGCAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGCCGCACTTGCATCTGGGACCACTGCATTAGCTACTCTTGTTATAGGAAGGTTGCTGGTGGTGGCAAATGCAGGAGATTGCCGAGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCAGGTTGCAACAAAGAAAAGAAGCGTATCGAGGCATCTGGGGGGTATGTCTACGATGGATATCTCAATGGACAACTTAATGTTGCTCGTGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGACGGTGGACCACTGACTGCAGAACCAGAACTTATGACTACAAAACTGACTGCCGAGGACGAATTTCTCATCATTGGTTGTGATGGGATTTGGGATGTATTTCGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGATCCAGCCATGTGTAGTAAGGATCTGGTTGACGAGGCTTTAAAGAGAAAAAGTGGAGACAATTTGGCTGCAGTCGTGGTTTGCTTCCAGCAGCAACCTCCTCCTAACTTGGTGGCACCACGCTCTAGAGTACAACGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGGACAGCTTGGGTAACTGA 1110 0.4649 MEEIEGVNCCSESESRSSSVTRPPNPNPPSYRQCKLVRHASLMNTKLSDVSAEPEHVTEDCQSDFFPMLRSGACTDIGFRSNMEDAYVCVDNFMEDYGLKNHIDGPSAFYGVFDGHGGKHAADFACLHLPKFIVDDKDFPRDIERIVASAFLQADNAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPGCNKEKKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVQRSFSAEGLKELQSFLDSLGN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0602 369 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 58 355 - -
Gso6g0602 369 SMART PP2C_4 60 331 IPR001932 -
Gso6g0602 369 PANTHER PROTEIN PHOSPHATASE 2C 58 355 IPR015655 GO:0004722|GO:0006470
Gso6g0602 369 MobiDBLite consensus disorder prediction 1 31 - -
Gso6g0602 369 Pfam Protein phosphatase 2C 73 325 IPR001932 -
Gso6g0602 369 ProSiteProfiles PPM-type phosphatase domain profile. 70 333 IPR001932 -
Gso6g0602 369 Gene3D - 47 337 IPR036457 -
Gso6g0602 369 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169
Gso6g0602 369 SUPERFAMILY PP2C-like 64 335 IPR036457 -
Gso6g0602 369 CDD PP2Cc 70 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0602 Gso-Chr6 5548641 5551877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0602 1 369 PP2C-type Phosphatase Gene Family AT2G25620 67.342 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0602 K14803 - gmx:100804558 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0602 4 5802233 5805616 Gso6g0602 6 5548641 5551877 GST