Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0574 ATGCCTCAGTTGCTACACGGGACGCTTAAGGTAACCATATTTGAAGTTGATAGACTACATACTGGATGTCATTTGGATTTCTGCCAGAAGGGCACAACACACAAGGGGAAGAGATTTCTAGCCCAAGTCAAGGGATGTCTGCTGTGCCGGCCTGAGATTGTTGGAACAAGACTCTATGCAACAATTGATTTAGACAAGGCAAGGGTTGGACGAACCAGAATGATAGGAAACCAACCTTCTCACCCCAGGTGGAACGAGACCTTCGAAATCTACTGTGCCCATCAAATCTCAAAGATCATATTCACTGTCAAAGATGGTAACCCAATTGGAGCAACTCTAATTGGAAGAGCCTCTGTCCCCGTGGAGCAAGTTCGCAAGGGCCCCATAGTTAAGCGTTGGGTTGAGATATTAGACGAAGAAGATCAACGTCCTGTACCTGGTCACGCCAAAATCCGTGTCAGCGTGCAATTCTACGATGTCACCGATGACACAACATGTCTATGGTCTCAGGGTATAAGCATGCCATTTTTTGGAGTACCTCGTACTTTTTTCAATCAAAGAGAAGGTTGCAATGTTACTTTGTACCAGGATGCTCATGTCCCACGTGGCATTGGTGTTGTCCCTTACATTCCAATATCCGAAGAAAAAGATTACATGCCAGCAATGTGTTGGGAGGACATTAACAAAGCCATTAATGAGGCTAAGTACTTTATTTACATAACTGGTTGGGCTGTTTACACTGAAATCACCTTAGTTAGAGACAAAGACGAATCAGAAACACTTGGGGAGTTACTTAAGAGGAAAGCTGATCAAGGTGTTAAAGTTCTTTTGCTTATTTGGAATGACAGAACTTCTGTTCCAGAATTGAAAGATGGCTTCATGGCAACACATGATCAGGAAACTGCTGGTTACTTTAGAGGCACAAAGGTGCAATGTGTTTTGTGTCCACGAAACCCGGATGATGGAAGAAGCATAGTTCAAGGCCTTAAAACCTCAACAATGTTCACTCACCACCAGAAGAGTGTAGTAGTTGATGGCCATGTTGTAGGATCAGAGAAGAGAAGTGTCATAAGTTTCATAGGTGGCATTGATCTTTGTGATGGGAGGTATGATACAAGGGATCATCCTCTATTTTCAACTTTGAATACTATGCATAGAAATGATTTCCATCAGCCAACTTTCCCAAATGCTTCCATAGATAAAGGCGGTCCAAGAGAGCCGTGGCATGACATTCATTGCAAGCTAGAAGGGCCTATTGCTTGGGATGTCTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTTGGGAAGAAGTTGTTGTACTCACTTGATGATCTTGATGAGATTCTTGTCCACCCATCTGAAGCACAAAAATCAGAAGTGGGAGTAGAAGAAACATGGAATGTTCAGTTGTTTAGATCAATTGATGGTGGTGCTGCTTCTGGCTTCCCCCAAACCCCGAAAGAAGTTTCTGAATTAGGCCTTGTTAGTGGGAAAGACAATGTCATCGAGAGAAGCATTCAGGATGCATACATTCATGCTATTCGGCGTGCGAAAAACTTCATCTACATTGAGAACCAGTACTTCCTAGGGAGTTCATATGGTTGGCAAGCAAGTGGTGATATTGTGGTTGAGGACATTGGTGCTTTGCATCTTATACCAAAGGAGATATCATTGAAGATTGCAAGCAAGATTGAAGCAAAAGAGAGGTTTTCTGTGTACATAGTTATCCCTATGTGGCCAGAAGGTGTACCTAGCAGTGATTCGGTTCAGGCAATATTGGATTGGCAGAAGAGAACCATGGAGATGATGTATTCTGACATTACTGATGCCTTAAAAAAAACTGGCATTCAAGCACGCCCTCGAGATTATTTGACATTTTTTTGCCTTGGCAAGAGGGAGAATAAGGATCCAGGAGATTATACTCCTCTAGAGAAACCAGAGCCTGATAGTGACTATGGAAGAGCACAAAATTCTAGGAGATTCATGATCTATGTTCATTCCAAAATGATGATAGTTGACGACGAATACATAATCGTTGGTTCAGCTAACATAAATGAAAGATCAATGGAGGGTGCAAGAGACACAGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATCGAGTGGGCGACCCAAAGGGGAGATATATAGATTTCGACGTGCACTATGGTATGAGCACCTTGGGGATGATGGTTTTGGTTCAAAAATATTCGATTTTCCCGAACATTTGGAATGCATCAATCATGTGAATAAACTTGCTGAGGCCAACTGGGACATGTACTCAATGGAAACATTTGTTGAAAATAAAAGACAATTTCACCACCTAATGTGCTACCCCATACAAGTAACCAATGATGGAGCCATAACAAATCTTCCGGGGTTTGAATATTTTCCTGACACCAAGGCTCGGATTTTGGGTTGCAAATCAAAACTTATTCCTTCAATTCTCACCACTTAG 2466 0.4238 MPQLLHGTLKVTIFEVDRLHTGCHLDFCQKGTTHKGKRFLAQVKGCLLCRPEIVGTRLYATIDLDKARVGRTRMIGNQPSHPRWNETFEIYCAHQISKIIFTVKDGNPIGATLIGRASVPVEQVRKGPIVKRWVEILDEEDQRPVPGHAKIRVSVQFYDVTDDTTCLWSQGISMPFFGVPRTFFNQREGCNVTLYQDAHVPRGIGVVPYIPISEEKDYMPAMCWEDINKAINEAKYFIYITGWAVYTEITLVRDKDESETLGELLKRKADQGVKVLLLIWNDRTSVPELKDGFMATHDQETAGYFRGTKVQCVLCPRNPDDGRSIVQGLKTSTMFTHHQKSVVVDGHVVGSEKRSVISFIGGIDLCDGRYDTRDHPLFSTLNTMHRNDFHQPTFPNASIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKKLLYSLDDLDEILVHPSEAQKSEVGVEETWNVQLFRSIDGGAASGFPQTPKEVSELGLVSGKDNVIERSIQDAYIHAIRRAKNFIYIENQYFLGSSYGWQASGDIVVEDIGALHLIPKEISLKIASKIEAKERFSVYIVIPMWPEGVPSSDSVQAILDWQKRTMEMMYSDITDALKKTGIQARPRDYLTFFCLGKRENKDPGDYTPLEKPEPDSDYGRAQNSRRFMIYVHSKMMIVDDEYIIVGSANINERSMEGARDTEIAMGAFQPRHLASSGRPKGEIYRFRRALWYEHLGDDGFGSKIFDFPEHLECINHVNKLAEANWDMYSMETFVENKRQFHHLMCYPIQVTNDGAITNLPGFEYFPDTKARILGCKSKLIPSILTT* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0574 821 SUPERFAMILY Phospholipase D/nuclease 179 443 - -
Gso6g0574 821 SMART pld_4 333 369 IPR001736 GO:0003824
Gso6g0574 821 SMART pld_4 662 689 IPR001736 GO:0003824
Gso6g0574 821 PIRSF PLD_plant 1 821 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gso6g0574 821 Pfam C2 domain 8 135 IPR000008 -
Gso6g0574 821 Pfam Phospholipase D C terminal 738 811 IPR024632 -
Gso6g0574 821 Gene3D Endonuclease Chain A 213 460 - -
Gso6g0574 821 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 333 369 IPR001736 GO:0003824
Gso6g0574 821 Gene3D Endonuclease Chain A 484 706 - -
Gso6g0574 821 PANTHER PHOSPHOLIPASE D ALPHA 3 3 821 - -
Gso6g0574 821 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Gso6g0574 821 SMART C2_3c 8 133 IPR000008 -
Gso6g0574 821 CDD C2_plant_PLD 1 158 - -
Gso6g0574 821 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 160 IPR035892 -
Gso6g0574 821 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 662 689 IPR001736 GO:0003824
Gso6g0574 821 Pfam Phospholipase D Active site motif 333 369 IPR001736 GO:0003824
Gso6g0574 821 Pfam Phospholipase D Active site motif 663 689 IPR001736 GO:0003824
Gso6g0574 821 Gene3D C2 domain 6 168 IPR035892 -
Gso6g0574 821 PANTHER PHOSPHOLIPASE D 3 821 IPR015679 -
Gso6g0574 821 SUPERFAMILY Phospholipase D/nuclease 507 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0574 Gso-Chr6 5322591 5327465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0574 3 821 Phospholipase D Gene Family (Wang group) AT3G15730 61.271 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0574 K01115 - gmx:100794115 1697.56