Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0573 ATGCCGCATTTGCTGCACGGGAGGCTCGATGTGATCATATACGAGGTCGACACACTACCAACTCTCAACGACTGCAATCTTAACCTCTGCAGCAAGGGTACAAGTAGAAGCGTGGGGAAGAGATTTCTTTCCCAACTCAAGAGTTGTTTTCTCTGTCAATGCCAATGCCAGCCAGAGTTTGTGGAGACGGGTCTCTATGCAACAATTGATTTAGATAAGGCAAGGGTTGGAAGGACTAAATTGTTAAATGATCAATCCTCCAACCCCACGTGGGACGAGACCTTTCACGTATACTGTGCCCATTTGATCTCCCATGTTATATTCACTGTCAAACAAAAAGATCCAATTGATGCAACTCTAATTGGAAGAGCTTATGTCCCAGTTGAGCAAGTTGTGAATGGCAACATAGTGGACGAATGGGTCCAAATTTTAGACGAGGATCATAACCCTATACCAAGTGAGTCTAAAATCCATGTCAAAATGCAATTCTCTAGTGTTAGGAATGACATAAACTGGTCTCAAGGAATAAGGAGTCCAAGGTTTCAAGGAGTTCCTCACACCTTCTTTAGTCAAAAAAATGGTTGCAAAGTTACTTTGTACCAAGATGCTCATGTCTCAGATGGTTTTGTGCCATGGATCCCCTTGTCAGGAGGAAAACCTTATGAGCATAGGAAATGTTGGGAGGATATTTATAATGCCATTATGGATGCTAGGAACTTTATTTATATAACTGGTTGGTCTGTGTACAGTGAAATAACCTTGATTAGGGACCCAATGAAGCCTACAACAAGAATCACCCTTGGGGAACTGCTCAAGATGAAAGCTGAGGAAGGTGTCAAGGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTGCCAGATTTCAAGAAAGATGGCTTGATGGCAACTCATGATCAAGAAACTGCTGATTACTTCAAAAACACAAAGGTGAAATGTGTTTTGTGTCCACGGAACCCAGATGATGGGAAAAGCATAGTGCAAGGTTTTGAAACTTCAACAATGTTCACTCATCACCAAAAGACTATAGTTGTTGACACCCAAGTTGCTATGGGACAACAAGGACAAAAGAGAACAATAGTAAGCTTTGTAGGTGGCATTGATCTTTGTGATGGGAGATATGATACTCAGGAACATCCTCTATTTTCAACTTTGGACACAGTGCATAAAGATGATTTCCATCAGCCAAATTTCCCTGGTGCTTCCATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGTTAGAAGGGTCTGTTGCTTGGGATGTTTTGTACAATTTTCAACAAAGGTGGGAGAAGCAGGTTGGAAATCAGCTCCTATTCTCTTCAAGCAAGCTTGATGAGTACTTTGTCCCTCGATCCACGGTGGTGACAACAAATGAAAATGAGACATGGAATGTTCAGTTGTTCAGATCCATTGATGGTGGTGCTGCTTCTGGCTTTCCCCCTGACCCAGAAGAAGCGGCTGAGTTAGGCCTCGTTAGTGGAAAAGATAACATCATTGATAGAAGCATTCAAGATGCTTATATAAGCGCTATTCGGCGAGCCAAAAACTTTATCTACATTGAAAACCAGTATTTCCTAGGGAGTTCATATGGTTGGCAAGCATCTGATATTGTGGTTGAGGATATTGGTGCTTTGCATCTTATACCAAAGGAGCTGTCATTGAAGATTGTTAGCAAGATTGAAGCAGGGGAGAGGTTTTCAGTGTATGTTGTTATACCAATGTGGCCAGAAGGCATACCTGAGAGTGGTTCAGTTCAGGCAATATTAGACTGGCAAAGGAGAACAATGGAGATGATGTATGCTGATATAGCCAAAGCCATTCAGAGAAAAAGAATTCAAGCCAATCCAAGGGACTACTTGACCTTTTTCTGCCTTGGAAACCGTGAGGGTAAGAAGGATATGGAATATACTCCTACTGAGGCACCAGAGCCTGATACTGATTATGCTAGAGCACAAAAGGCTAGGCGATTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATTATAATTGGATCTGCCAACATAAACCAGAGATCAATGGATGGAGAAAGAGACACTGAGATTGCAATGGGTGCATTCCAACCACGTCATATAGCATATAATGGGGCACCCAGAGGACAAATATATGGATTTAGGCGTGCACTATGGTGTGAGCACCTTGGGGATCATGGGGATACAAACATCTTCGACAATCCAGAAAGTGTGGACTGCATCAGGCTTGTGAATCATCTTGCTGAAACCAATTGGGACATATACTCTAAGGAAACTTTTGATGAGTATAGAGAATTTCACCACCTCATGCGCTACCCCATAGAAGTAACCAACAATGGAGCAATAACGATCCTTCAAGGGCTAGAACATTTTCCTGACACCAAGGCTAAGATTTTGGGCTCCCAATCAGTTTACCTTCGTCCAATTCTCACCACCTAG 2481 0.4236 MPHLLHGRLDVIIYEVDTLPTLNDCNLNLCSKGTSRSVGKRFLSQLKSCFLCQCQCQPEFVETGLYATIDLDKARVGRTKLLNDQSSNPTWDETFHVYCAHLISHVIFTVKQKDPIDATLIGRAYVPVEQVVNGNIVDEWVQILDEDHNPIPSESKIHVKMQFSSVRNDINWSQGIRSPRFQGVPHTFFSQKNGCKVTLYQDAHVSDGFVPWIPLSGGKPYEHRKCWEDIYNAIMDARNFIYITGWSVYSEITLIRDPMKPTTRITLGELLKMKAEEGVKVLMLVWDDRTSVPDFKKDGLMATHDQETADYFKNTKVKCVLCPRNPDDGKSIVQGFETSTMFTHHQKTIVVDTQVAMGQQGQKRTIVSFVGGIDLCDGRYDTQEHPLFSTLDTVHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGSVAWDVLYNFQQRWEKQVGNQLLFSSSKLDEYFVPRSTVVTTNENETWNVQLFRSIDGGAASGFPPDPEEAAELGLVSGKDNIIDRSIQDAYISAIRRAKNFIYIENQYFLGSSYGWQASDIVVEDIGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGIPESGSVQAILDWQRRTMEMMYADIAKAIQRKRIQANPRDYLTFFCLGNREGKKDMEYTPTEAPEPDTDYARAQKARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGERDTEIAMGAFQPRHIAYNGAPRGQIYGFRRALWCEHLGDHGDTNIFDNPESVDCIRLVNHLAETNWDIYSKETFDEYREFHHLMRYPIEVTNNGAITILQGLEHFPDTKAKILGSQSVYLRPILTT* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0573 826 Gene3D C2 domain 54 174 IPR035892 -
Gso6g0573 826 PANTHER PHOSPHOLIPASE D 2 826 IPR015679 -
Gso6g0573 826 SMART pld_4 669 696 IPR001736 GO:0003824
Gso6g0573 826 SMART pld_4 340 379 IPR001736 GO:0003824
Gso6g0573 826 Gene3D Endonuclease Chain A 486 713 - -
Gso6g0573 826 Pfam Phospholipase D C terminal 744 815 IPR024632 -
Gso6g0573 826 SUPERFAMILY Phospholipase D/nuclease 168 451 - -
Gso6g0573 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 669 696 IPR001736 GO:0003824
Gso6g0573 826 PANTHER PHOSPHOLIPASE D ALPHA 3 2 826 - -
Gso6g0573 826 SUPERFAMILY Phospholipase D/nuclease 503 736 - -
Gso6g0573 826 Pfam C2 domain 46 142 IPR000008 -
Gso6g0573 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 62 165 IPR035892 -
Gso6g0573 826 Pfam Phospholipase D Active site motif 340 379 IPR001736 GO:0003824
Gso6g0573 826 Pfam Phospholipase D Active site motif 670 696 IPR001736 GO:0003824
Gso6g0573 826 Gene3D Endonuclease Chain A 216 472 - -
Gso6g0573 826 SMART C2_3c 8 140 IPR000008 -
Gso6g0573 826 CDD C2_plant_PLD 1 163 - -
Gso6g0573 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 340 379 IPR001736 GO:0003824
Gso6g0573 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gso6g0573 826 ProSiteProfiles C2 domain profile. 1 141 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0573 Gso-Chr6 5316535 5320756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0573 3 826 Phospholipase D Gene Family (Wang group) AT3G15730 63.317 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0573 K01115 - gmx:100791688 1707.58