Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0569 ATGAGATTAGGTGTGAGTGTGAGTGTGAGTGTGCGGTGCTCAATCGGCACCGCTTCAGGCAACACCCAAACCGATTATCCCGCCAAATTCCAACGGTCATCTTTCTCAACTGCCAACTTCCTCCCCGACAACGCTTCTTCAGATTTAGCAGTTTCAATTTCGAGTAGTAGCAGCAGGAGAGGGCTAATACGCATAGCCACGTTGCCATGTCTTCTTCCCCTCATAGGTTGCCTCCCAGCCAACGCCATGCAGCCAGGTTCAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTCTTGTCCAAGGGAAAGGCTGCTGGCGTGCTTCGATTGGTATTCCATGATGCCGGAACCTTTGACATCGATGACAGTACAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATGCTGGCCTGAAAAAATCAGTAAAGGCATGCTCTGTCTCACTTTTTTCTCATTCCCCTTCTATCACTTCTATTTCTATTACTATTTGGAGAATTCCACATGATAGTGAGGTTCTGCAAAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCTTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATTCAAGTTTCACTGGGCAGATTAGATACACTGGTGCCTGATCCAGAAGGGAGACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTGAAGAAATGTTTCCAGAGCAAAGGCTTTTCAACACAAGAACTTGTGGCTTTGTCTGGAGCCCACACTATTGGAAGTAAAGGTTTTGGAAGCCCAATTTCTTTTGACAATTCATATTATAAGGTTCTTTTGGAGAAGCCGTGGACGTCTTCAGGTGGTATGCCGAGTATGATTGGACTTCCTTCAGATCACGCTCTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCAGACAGTGAGAATCTATTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGCGGAATAGCTTATAA 1050 0.4448 MRLGVSVSVSVRCSIGTASGNTQTDYPAKFQRSSFSTANFLPDNASSDLAVSISSSSSRRGLIRIATLPCLLPLIGCLPANAMQPGSKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDIDDSTGGMNGSIVYELERPENAGLKKSVKACSVSLFSHSPSITSISITIWRIPHDSEVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRLDTLVPDPEGRLPEESLNASGLKKCFQSKGFSTQELVALSGAHTIGSKGFGSPISFDNSYYKVLLEKPWTSSGGMPSMIGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVRRNSL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0569 349 ProSitePatterns Peroxidases active site signature. 106 117 IPR019794 GO:0004601
Gso6g0569 349 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 8 345 IPR044831 GO:0004601|GO:0034599
Gso6g0569 349 Gene3D Peroxidase, domain 2 234 336 - -
Gso6g0569 349 Gene3D - 178 343 - -
Gso6g0569 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 256 266 IPR019793 -
Gso6g0569 349 PRINTS Plant peroxidase signature 108 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 PRINTS Plant peroxidase signature 192 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 PRINTS Plant peroxidase signature 211 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 PRINTS Plant peroxidase signature 255 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 ProSiteProfiles Plant heme peroxidase family profile. 106 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 Pfam Peroxidase 95 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 8 345 - -
Gso6g0569 349 SUPERFAMILY Heme-dependent peroxidases 92 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 Gene3D - 87 155 - -
Gso6g0569 349 PRINTS Haem peroxidase superfamily signature 106 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0569 349 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0569 Gso-Chr6 5275071 5280578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0569 92 344 Peroxidase AT5G40150 30.405 3.61e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0569 K00434 - gmx:100792735 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0572 4 5540534 5543739 Gso6g0569 6 5275071 5280578 GST