Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0511 ATGGCTGCTTGCTCAAGAACTTCTCTTTTGCTCCTTTTCTTTCTCTTTGGATTCTCCGCAGCTAAGGAACTATTGGTTGGAGGCAAAATAGATGCTTGGAAGATTCCATCTTCTGAATCAGATTCCCTCAATCAATGGGCTGAAAGGTCTCGTTTCAGAGTCGGCGATCATCTTGTGTGGAAATATGAGAATGGGAAGGACTCAGTGTTGGAAGTAACAAGGGAAGATTATGCCAATTGCAGCACATCCAAGCCCATCAAAGAGTACAATGATGGAAACACAAAGGTGAAGCTAGAGCATGCTGGTCCATTCTACTTCATAAGTGGAGCAAAGGGGCACTGTGAGAAGGGACAAAAGTTGATTGTGGTGGTTATGTCTCCAAGGCACATTATTTCTCCAGCACCTTCTCCAACAGAGTTCCACTTTGAGGGTCCCGCTGTAGCTCCTACTAGCAGTGCCACAACGTTTCAAGTTGGCCTACTCACTGCTCTTGGAGTTTTGGCCATGTATGTGGTTTTTCTCAAGTAA 528 0.4508 MAACSRTSLLLLFFLFGFSAAKELLVGGKIDAWKIPSSESDSLNQWAERSRFRVGDHLVWKYENGKDSVLEVTREDYANCSTSKPIKEYNDGNTKVKLEHAGPFYFISGAKGHCEKGQKLIVVVMSPRHIISPAPSPTEFHFEGPAVAPTSSATTFQVGLLTALGVLAMYVVFLK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0511 175 Gene3D - 20 129 IPR008972 -
Gso6g0511 175 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Gso6g0511 175 PANTHER BLUE COPPER PROTEIN 5 168 IPR039391 GO:0009055
Gso6g0511 175 CDD OsENODL1_like 22 125 IPR041846 -
Gso6g0511 175 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 168 - -
Gso6g0511 175 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Gso6g0511 175 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0511 Gso-Chr6 4670832 4671930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0511 6 159 Phytocyanin Superfamily AT2G25060 57.419 1.01e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0511 - - gmx:100527928 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0515 4 4924878 4926069 Gso6g0511 6 4670832 4671930 GST
Gso14g0890 14 10432432 10433950 Gso6g0511 6 4670832 4671930 PCT
Gso17g1891 17 37837916 37839099 Gso6g0511 6 4670832 4671930 PCT
Gso6g0511 6 4670832 4671930 Gso14g0890 14 10432432 10433950 PCT
Gso6g0511 6 4670832 4671930 Gso17g1891 17 37837916 37839099 PCT