Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0508 ATGGGAATATATCTCAGCACTCCAAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACTGTCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGAGTCCACTTCATTTTTTGGTGTCTATGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTTTCTTCATCAACAGTTGTTCAAAAGTGAGACATACTTAACTGGAGATATAGGAGCCTCCCTTCAGAAAGCCTTTTTGAGAATGGATGAAATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATATTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGGAATTGCCATGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAGTTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGATTCGCGTTGTGTGATATCCAGGAAGGGCCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTCATTCACGTAGGACGAGTCAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAGTTTCTTTCTGCTGAAAAACAAATTGTAACTGCCAATCCAGACATCAACACTGTTGAGCTTTGTGACGAAGATGAGTTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTGGTTGATTTTGTTCATGAACAATTGCACTCGGAAACAAAACTTTCTGCCGTGTGTGAAAGAGTACTTGATCGGTGTTTGGCACCATCAACTGCCAGTGGTGAAGGATGTGACAACATGACCATGATTGTGGTGCAGTTCAAAAGACCTGCTCAGTCCAGTGTACCAGCAGAAGAGTCCTCTTCAAACTGA 1038 0.421 MGIYLSTPKTEKFSEDGENDCLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQLFKSETYLTGDIGASLQKAFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGNCHVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHVGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFVHEQLHSETKLSAVCERVLDRCLAPSTASGEGCDNMTMIVVQFKRPAQSSVPAEESSSN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0508 345 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Gso6g0508 345 PANTHER PROTEIN PHOSPHATASE 2C 1 336 IPR015655 GO:0004722|GO:0006470
Gso6g0508 345 SMART PP2C_4 12 327 IPR001932 -
Gso6g0508 345 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Gso6g0508 345 CDD PP2Cc 23 329 IPR001932 -
Gso6g0508 345 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 336 - -
Gso6g0508 345 Gene3D - 1 330 IPR036457 -
Gso6g0508 345 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Gso6g0508 345 Pfam Protein phosphatase 2C 153 314 IPR001932 -
Gso6g0508 345 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Gso6g0508 345 SMART PP2C_SIG_2 28 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0508 Gso-Chr6 4649763 4655844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0508 1 342 PP2C-type Phosphatase Gene Family AT2G25070 76.608 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0508 K17499 - gmx:100787778 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0514 4 4910158 4916340 Gso6g0508 6 4649763 4655844 GST
Gso14g0886 14 10396805 10402613 Gso6g0508 6 4649763 4655844 PCT
Gso17g1894 17 37860233 37866009 Gso6g0508 6 4649763 4655844 PCT
Gso6g0508 6 4649763 4655844 Gso14g0886 14 10396805 10402613 PCT
Gso6g0508 6 4649763 4655844 Gso17g1894 17 37860233 37866009 PCT