Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0498 ATGGGTTATCTCAATTCAGTTTTGTCATCTTCAAGCGAGGTTCATGCTGCAGGTGATGCAATTGCGAGTGGTGGGGGGCTAAGTCACAATAGAAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAGTCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTAATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATAACTGATGCATATAATCATACCGATTCTGAGTTGCTGAAATCAGAAAATAGCCATAATAGAGATGCTGGATCAACTGCTTCCACTGCTATTTTAGTTGGTGACCGCTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCTGACCAAACTGATGAGAGGCAAAGGATTGAAGAAGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCGTTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAATTGACAGCTCCCTTGAGTTTCTTATTCTGGCCAGTGACGGGCTATGGGATGTTGTCACAAATGAGGAAGCTGTTGCTATGATTAAATCAATTGAGGATGCTGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACATGTGTTGTCGTTCGTTTCTTGATGAACCAAGGTGGATCCAAAGACAAAGAGGTAGTAGCTCCTCCTCATAATAGTAGCTCTGCCAGTAGGAATCCTTCAGTAGAAGGTTTGTGTGATAGGTGA 945 0.4339 MGYLNSVLSSSSEVHAAGDAIASGGGLSHNRKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKKNLFSNLISHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVTNEEAVAMIKSIEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGGSKDKEVVAPPHNSSSASRNPSVEGLCDR* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0498 314 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Gso6g0498 314 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Gso6g0498 314 Pfam Protein phosphatase 2C 62 273 IPR001932 -
Gso6g0498 314 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Gso6g0498 314 PANTHER ALPHABET, ISOFORM E-RELATED 3 312 - -
Gso6g0498 314 SMART PP2C_4 24 278 IPR001932 -
Gso6g0498 314 CDD PP2Cc 33 280 IPR001932 -
Gso6g0498 314 SMART PP2C_SIG_2 30 280 IPR001932 -
Gso6g0498 314 Gene3D - 25 284 IPR036457 -
Gso6g0498 314 Coils Coil 243 267 - -
Gso6g0498 314 MobiDBLite consensus disorder prediction 288 314 - -
Gso6g0498 314 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0498 Gso-Chr6 4580508 4584959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0498 1 286 PP2C-type Phosphatase Gene Family AT4G31750 88.811 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0498 K17506 - gmx:100807396 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0504 4 4825893 4830640 Gso6g0498 6 4580508 4584959 GST