Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso6g0488 | ATGCTCGGCGAGATGGAGAATGATTCTATAGAGGACATGGACATTGAAGCCCTTCCTTCAATGTGGCCTCAAGATATTGGAACCGAGGTTGGGAAGCAGTTTAATATAGAAAAGGCTGGAAGGGACCAAGACATGTTAGAGGAGGTTACAATCATAGAGGAGCCAACTATAGTTGATTTCAAGCGTCTCATGGAGCTTACAGATTTTACAGAAAAGGGCTCTTCTCAGTTGGCATATCTAATGAAGCAATGGGAGTACAAACAGGCCAGTGTCGTGCGTCTTCTCAGAGAAGAACTTGACAACCTAAGCAAGCAAAGGCAGGATGCTGAGCTCAGGAAGTTGGAGATATTGGAAGAGCATCGATTCGAGGAAGAACAATATGGGGGAGATAAGCGTCCAGTTTCTATATTGGATGAAGTTTATGATGGTATATGGCAAGATATACCTTGCAGGAAAAGTGATGTTGTGGTTCAAAACAAGAGGAGTGAGATTGATGTTGAGTATGACACTGTCATGTACTGGAAACAGCGAGCGTTGCATTCAGAGAAGCAGCTGGAGGCAAGTATCCAAAGAGAAGAGATACTTGAAGAAAAGTTGCATGAAAGAATAGCAAACATTGAAAGGCAGTCCTCTCCTGTGGAAGAACTCTCCCAGATCCTGAAGAGAGCAGATAATTTCTTGCATTTTATACTCCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATTGCTTTATCTATAATCATTTTCCAAGTTTACACGAGGAGGATATCATAGGAAAAACCGATGTTGAAATATTCACGGGAGCTGGTGTTAAGGAAGCTCAAGAATTTAAGAGAGAAGTTTTGGAAAAAGGACTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTTGGGTCAAAGACATTTTTGATATATGTAGAGCCTGTGTTTAGCAAAGCAGGGGAGACAATTGGAATAAATTACATGGGAATGGATATAACAGATCAGGTGAGAAAAAGAGAAAGGATGGCAAAGATTCGGGAAGAGATTGCTGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGTTGGCAACAATGTCTCATGAGATAAGATCTCCATTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTAACACAAAACTCGATTGGGAGCAAAGACAACTCCTGGATGTCATGCTATCTTCGGGAGATTTGGTTCTTCAAATTATAAATGACATACTTGATCTTTCCAAGGTCGAGTCAGGAGTGATGAAATTGGAAGCTACAAAATTCCGGCCAAGAGAGGTAGTCAAGCATGTACTCCAGACCGCTGTGGTTTCATTGCAGAAAATATTAACCTTAGAAGGACATGTAGCAGATGATGTACCTATTGAGGTCATTGGTGATGTTTTAAGGATGCGGCAAATTCTCACAAATTTAATTAGCAATGCCATCAAGTTTACCCATGAAGGCAGAGTTGGAATAAACCTTTACGTTGTGTCAAAGCCTAATTTTGCAAAAGCAGAAGCAATGAATGGAGACACTGAGGAGCAACCTTATTCAGCTGAAACAACGGTGTGGATACGTTGTGATGTATATGACACAGGCATAGGAATACCAGAAGATGCTATACCAACCTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCACACTCGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGGGGTCAACTAACAGTTTCTAGCAAAGAACACTATGGTTCTACTTTCACTTTCATTCTTCCATACAAGGTTTCAATCGCTTGTGATCATTCTGATGATCCGGATGAGCTTTCTGATTTGGAGAATAATGATGTCGCATCTGATGATACAATAGAGAGTTTCTTCCAATACCAACCACACACTTTGGGCTCTCTTTTCTCTTCTAATGGATCTAGCAGGACACAGAAGTTATTAACACACAAAATTGGCTACACCAGCTCACATAAACTTGGTGGATTTTCTGAGAGTTTATATTCAAAAGGGACATGTTCAGTTGATGATGCATCTTCTGTGGTTGATGCTCCGGAGACGTCTGAATTGGCTAGTTCATCTGGTCACAGCCTAGAAACAAAGAACAAAAGTTTGGTTAGAAGAGATAAACAGCATCAAGATAAGGCTCGTGCTTGGTCCTTTAATGGTTATGCAGATTCCTCTGAAGTTACTGTGTCAAACGGAGAAATGGCTGGAGCAACAAAGTCAAGTGAACCCCAACAAACATGTCAGGGTCAAGGGAAGGCAAACACAACTACTCAATGTGTTACAAGCAGCAGCACATCAGAAGTAACCAAATCCACAATAAAGCCTAAGATCCTTCTTGTTGAAGATAACAAGATTAATGTCATGGTGACACAGTCCATGATGAAGCAATTAGGCCATAGCATAGATGTTGTGAACAATGGAGTGGAAGCAGTACGTGCAGTTCAGCGCCACACTTATGACCTGATTCTGATGGATGTCTGCATGCCAGTTATGGATGGTCTTCAGGAAACAAAACTGATTCGGACTTTTGAGGAAACAGGCAATTGTGATGCTGCAAGAAGTTCGGGAATTGAGGAAAGTCTACCAGATCCAGATTATGAATGTTATGTACCATTTACAAAGCGGGTCCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTTTTGCAAATGGTATGGACTCATTTGTGTCAAAACCTGTGACTTTCCAAAAACTGAAAGAATGTATTGAACAATACCTTGTAAATTTCAGCTAG | 2853 | 0.4108 | MLGEMENDSIEDMDIEALPSMWPQDIGTEVGKQFNIEKAGRDQDMLEEVTIIEEPTIVDFKRLMELTDFTEKGSSQLAYLMKQWEYKQASVVRLLREELDNLSKQRQDAELRKLEILEEHRFEEEQYGGDKRPVSILDEVYDGIWQDIPCRKSDVVVQNKRSEIDVEYDTVMYWKQRALHSEKQLEASIQREEILEEKLHERIANIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYCFIYNHFPSLHEEDIIGKTDVEIFTGAGVKEAQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDITDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSNTKLDWEQRQLLDVMLSSGDLVLQIINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAVVSLQKILTLEGHVADDVPIEVIGDVLRMRQILTNLISNAIKFTHEGRVGINLYVVSKPNFAKAEAMNGDTEEQPYSAETTVWIRCDVYDTGIGIPEDAIPTLFKRYMQVSADHTRKYGGTGLGLAICKQLVELMGGQLTVSSKEHYGSTFTFILPYKVSIACDHSDDPDELSDLENNDVASDDTIESFFQYQPHTLGSLFSSNGSSRTQKLLTHKIGYTSSHKLGGFSESLYSKGTCSVDDASSVVDAPETSELASSSGHSLETKNKSLVRRDKQHQDKARAWSFNGYADSSEVTVSNGEMAGATKSSEPQQTCQGQGKANTTTQCVTSSSTSEVTKSTIKPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVRAVQRHTYDLILMDVCMPVMDGLQETKLIRTFEETGNCDAARSSGIEESLPDPDYECYVPFTKRVPIVAMTANALSESAEECFANGMDSFVSKPVTFQKLKECIEQYLVNFS* | 951 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso6g0488 | 950 | CDD | REC_hyHK_CKI1_RcsC-like | 804 | 942 | - | - | |
| Gso6g0488 | 950 | ProSiteProfiles | Histidine kinase domain profile. | 379 | 618 | IPR005467 | - | |
| Gso6g0488 | 950 | Coils | Coil | 92 | 119 | - | - | |
| Gso6g0488 | 950 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 217 | 334 | IPR035965 | - | |
| Gso6g0488 | 950 | ProSiteProfiles | Response regulatory domain profile. | 803 | 946 | IPR001789 | GO:0000160 | |
| Gso6g0488 | 950 | PRINTS | Bacterial sensor protein C-terminal signature | 543 | 557 | IPR004358 | GO:0016310|GO:0016772 | |
| Gso6g0488 | 950 | PRINTS | Bacterial sensor protein C-terminal signature | 578 | 596 | IPR004358 | GO:0016310|GO:0016772 | |
| Gso6g0488 | 950 | PRINTS | Bacterial sensor protein C-terminal signature | 602 | 615 | IPR004358 | GO:0016310|GO:0016772 | |
| Gso6g0488 | 950 | PANTHER | HISTIDINE KINASE CYTOKININ RECEPTOR | 536 | 947 | - | - | |
| Gso6g0488 | 950 | PANTHER | HISTIDINE KINASE CYTOKININ RECEPTOR | 5 | 533 | - | - |
Showing 1 to 10 of 31 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information