Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0475 ATGAAATGGCTTGGGATTGGTGTTGAACTTGAACTATCATCACTTGATGAAGCAATCACTGCTGCATCTCTGAGTACATGTGTGCCAATAGAAAGTGATATTGCAAGCCTTGAAAAGAAAATTGAGTATGAATTTTCAGTCAAGGGACTCTTACTGGAGGCAATCACACATTTGTCTGAGAAAGAACTTGGGATTGGCTGCTGTTATGAGAGGCTTAAATTTCTTGGTGACTCGGTATTGGACCTGCTTATCACATGGCATCTTTATCAGAGTCACACAGATATTGATCCAGGGGTGTTGGCTGACTTACGTTCTGCTTCTGTCAATAATGACAATTTTGCTCAAGTTGCTGTTAGACATAACCTTCACCAGCACCTTCTACATAGCTCAGGATTATTAGTGAGCCAGATATTAGAATATGTGAAGGTCATTTCTGAATCAGATCCCAGATCACTTCCAAGTATTAGAGCTCCCAAGGCACTTGGAGATGTAGTGGAAAGTATTGTCGGGCCTATACTAATTGGTACCAAGCTAAGTCTTGACCAAGTGTGGAACGTTTTCTATCCTCTATTATCTCCCATTGTTACTCCTGATAAACTTGAATTGCCTCCATTTCGTGAATTAAATGAATTATGTGATTCACTTGGGCATTTTGTAAAAGTAAAAGAAAATTGTGAAAAAATGGGATCAGCAATGCATGTTGAGGTTAGTGTACAGCTTCCAAATGCCCTATTGGTTCGTGAAGGAAAGGGGCCAAATAAAAAAACTGCAAAAGGAGAAGCTGCTTTTCATTTGTTGAAGGATCTTGAGAAGCGGGGAATTTTACATGGTAGTCTCATGTCCAAGGGAAAAAGAGACAATCCTGACCATATCTATGATTCATTTCATCTCAAAAGGGATTCTAGTATTTGTTCTTCTCTAATTGAAGAACATTCCTCAGAGCCAGCATCACATAAAAGGCACACATTGGATGAAACTAACTTAACTGCATTTAATTGA 999 0.3904 MKWLGIGVELELSSLDEAITAASLSTCVPIESDIASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLYQSHTDIDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILEYVKVISESDPRSLPSIRAPKALGDVVESIVGPILIGTKLSLDQVWNVFYPLLSPIVTPDKLELPPFRELNELCDSLGHFVKVKENCEKMGSAMHVEVSVQLPNALLVREGKGPNKKTAKGEAAFHLLKDLEKRGILHGSLMSKGKRDNPDHIYDSFHLKRDSSICSSLIEEHSSEPASHKRHTLDETNLTAFN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0475 332 Gene3D Ribonuclease III domain 21 197 IPR036389 GO:0004525|GO:0006396
Gso6g0475 332 Pfam Dicer dimerisation domain 208 285 - -
Gso6g0475 332 SUPERFAMILY dsRNA-binding domain-like 204 277 - -
Gso6g0475 332 MobiDBLite consensus disorder prediction 309 332 - -
Gso6g0475 332 PANTHER DICER-RELATED 1 302 - -
Gso6g0475 332 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 248 271 IPR014720 -
Gso6g0475 332 CDD RIBOc 50 198 IPR000999 GO:0004525|GO:0006396
Gso6g0475 332 Pfam Ribonuclease III domain 70 174 IPR000999 GO:0004525|GO:0006396
Gso6g0475 332 PANTHER ENDORIBONUCLEASE DICER HOMOLOG 3 1 302 - -
Gso6g0475 332 SUPERFAMILY RNase III domain-like 32 197 IPR036389 GO:0004525|GO:0006396
Gso6g0475 332 SMART riboneu5 49 200 IPR000999 GO:0004525|GO:0006396
Gso6g0475 332 Gene3D - 203 272 - -
Gso6g0475 332 ProSiteProfiles Ribonuclease III family domain profile. 34 177 IPR000999 GO:0004525|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0475 Gso-Chr6 4341344 4347813 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0490 4 4635727 4655786 Gso6g0475 6 4341344 4347813 GST