Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0463 ATGCCAGAACCAACCACGAATATGCGCCACGGCACCAAGGTTTGGGTCCACGACAGAGATTCCGCTTGGATTCCTGCTGAACTACTCGAATCTTCCGGAAATAAAGTTACTGTTGCTACCGCTTCGGGCAAGAAAGTTGTTGCTCTTCCGGAGAACGTGTTTCCCCGGGACGCAGATGAAGAAGAGCATGGCGGAGTCGAAGATATGACGAGATTGGCTTACTTGAATGAGCCGGGGGTGTTGTACAATCTCCGAAGAAGATATTCGCTGAACGATATTTATACGTATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAAGGGAGCTCCATTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCCGATGCATCTTATAGAGCAATGATGAATGGAGGACAAAGCCAGTCTATCTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAATTGATTATGCAATACCTTACCTTTGTTGGTGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTTTTAGAGGCATTTGGAAATGCAAGGACTGTCTGGAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAATGGTAGAATATCTGGGGCCGCAATTAGAACTTACTTACTAGAAAGATCACGAGTAGTGCAGATAACAGATCCAGAAAGAAATTATCACTGTTTTTATCAATTGTGCGCATCTGAAAGGGATGTAGAGAAGTATAAGTTGGGAAAGCCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTCTATGAATTAGATGGCGTAAGCAGTGCTGAAGAGTACATGAAGACGAGGAGAGCAATGGATATTGTTGGCATAAGTCACGAGGATCAGGAAGCCATATTTTCCACCTTAGCTGCAATTTTACATTTGGGAAACGTTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTAATAAAAGATGAGAAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTCAGATGTGATTTGAACCTACTGCTAGCAACACTATGCACCCGTTCAATACAAACCCGAGAAGGAAATATCATCAAAGCTCTTGACTGTAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTCTGTTTGATTGGCTTGTTGATAAGATCAATGGTTCTGTCGGGCAAGATATCAATTCCCAGAAGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTCCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAAGAATACAACAAAGAAGAAATCAACTGGAGTTACATTGAATTTATTGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATTATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCATGAAACATTCTCAACCAAGTTGTTTAAGCACTTCCTGTCACACCCTAGGCTAGAAAAGGAGAAGTTTTCTGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACTTATCATACAAACACCTTCTTAGAGAAAAATCGTGATTATGTAGTCGTAGAACATTGCAATCTATTATCCTCTTCAAAATGCCCCTTTGTGTCGGCTCTTTTTCCTTTGCTAGCAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGGTTTAAGCAACAACTTCAATCACTCATGGAAACGCTTAACACAACAGAGCCTCATTACATTCGATGTGTCAAGCCGAATTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTGGATCGCTTTGGACTAATAGCTCCCGAATTTATGGATGGAAGTTATGACGATAAAGCTGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAGGTATTTCTCAGGGCTGGTCAAATTTGCATTTTAGACTCTAGACGTGCGGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGACTGCGGACATTTATTGCGCGCCGGGATTTCATCTCAATCCAAGCTGCTGCTCTTTCTATTCAAGCATGCTGCAGGGGATGCATTGGCCGAAAGATATATGCTTCTAAACGGGAGACAGCAGCAGCTATCTCCATTCAGAAATATATCCGTATGTGTCTGATGAGGCATGCTTATGTGAAATTATATTATTCTGCTATTATTGTACAATCCAATGTTCGTGGTTTCACAACTCGGCAAAGATTCCTGCATAGAAAAGAACACAAAGCTGCCACTTCTATTCAGGTCTATTGGAGGATGTGCAAGGCTCGGTCTGCCTTCCTAAAACATCAAAATTCAATTGTAGCAATACAATGCCTTTGGCGGTGTAAACAAGCAAAAAGAGAGCTTCGCAGACTTAAACAAGAGGCTAATGAAGCTGGAGCCTTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTTGAGAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAGCATGTTGAGATTTTCAAGCTACAGAAGATGGTAGATGCTCTGAATCTTGAATTAGATGCAGCTAAACTAGCAACAATTAATGAGTGCAACAAAAATGCAGTTTTGCAAAATCAGTTGCAATTGTCAGTAAAGGAAAAATCCGCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCGAAAGGAAAATTCTCTATTAAAGGGTTCATTGGATGCCTTTGAAAAGAAGAGCACGGCTTTGGAGCTTGAGCTTGTGAATGCTCGGAAAGACCATGATAAAACCATTCAGAAAATGAGGGAGTTTGAACATAAGTGTTCTGAACTTGGGCAAAATGTCAAAAGTCTTGAAGGAAAGCTATCAAGTTTAGAGGATGAAAATCACGTGCTTCGTCAGAAAGCCTTAAGTGTATCTCCTAAGAGTAACCATCGGGGTTTGACAAAGTCATTATCCGAAAAATACTCAAGTGCGATAGCCCCCCGCACCGAGCAAAAGCCCACATTTGAATCACCCACACCTACAAAACTTATTCCCCATATTACACGTGGCGGCTTGTCAGACTCTCATCGATCAAAATTAACAGCAGATAGGCACCAGGATAACTATGAACTCCTCTCTAGGTGCATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTAGTATCATATACAAATGTCTTCATCATTGGCATGCATTTGAATCTGAGCGGACAGCCATATTTGATTACATAGTTGATGGAATTAATGATGTCATTAAGGTTGGAGACGATGACATTGTCTTGCCATATTGGCTGTCCAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATTCAAATGTTTTTTTAACAACCACTGCTCAACTTTATACCAGATCATCTGGCTTGACCAGCCGAATAGGGAATGGAATGAGGTCTCCATTGAAGCTTCTTGGATATGATGATAGTGCATCACATGTGGAGGCAAGATATCCAGCTATTCTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGGGATAATTTGAAAAAGGATCTGTCTCCACTTCTGGGATCATGTATTCAGGCACCTAAAACGGGTCGAGTGCAAGGTGGAAAATCATCTAGATCTCCTGGTGGGCTTCCTCAACAATCACCCGTTGCTCAATGGGACAACATCATCAATTTTTTGGATTCACTCATGAGCCGCTTATGTGCAAATCATGTACCATCCTTCTTCATCCGCAAGTTAGTTACTCAGGTTTTTTCCTTCATCAATATTACACTCTTCAACAGCCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTCTCGCAGAACTTGAGAAATGGATAGCAAATGCAAAAGAGGAGTATGCAGGAACGTCCTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTGACTGTTAGGCAAATTTATCGAATCAGTACCATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGAGTTTGACCTCTAATTCATTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGACAAGGCAATCCCTGCTATAAATACTGATGACATTGATCTTCCAGCATTTTTGTGTGAATATCCCTGTGCCCAGTTTCTTATTTTACATAAGTAA 4566 0.4056 MPEPTTNMRHGTKVWVHDRDSAWIPAELLESSGNKVTVATASGKKVVALPENVFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLRRRYSLNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVWNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGKPSHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISHEDQEAIFSTLAAILHLGNVEFSPGKEHDSSVIKDEKSRFHLQMAANLFRCDLNLLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINGSVGQDINSQKQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQHVFKMEQEEYNKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTNTFLEKNRDYVVVEHCNLLSSSKCPFVSALFPLLAEESSRSSYKFSSVASRFKQQLQSLMETLNTTEPHYIRCVKPNSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKAVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRRLRTFIARRDFISIQAAALSIQACCRGCIGRKIYASKRETAAAISIQKYIRMCLMRHAYVKLYYSAIIVQSNVRGFTTRQRFLHRKEHKAATSIQVYWRMCKARSAFLKHQNSIVAIQCLWRCKQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKHVEIFKLQKMVDALNLELDAAKLATINECNKNAVLQNQLQLSVKEKSALERELVAMDEVRKENSLLKGSLDAFEKKSTALELELVNARKDHDKTIQKMREFEHKCSELGQNVKSLEGKLSSLEDENHVLRQKALSVSPKSNHRGLTKSLSEKYSSAIAPRTEQKPTFESPTPTKLIPHITRGGLSDSHRSKLTADRHQDNYELLSRCIKEDLGFKNGKPLAASIIYKCLHHWHAFESERTAIFDYIVDGINDVIKVGDDDIVLPYWLSNTSALLCLLQRNLHSNVFLTTTAQLYTRSSGLTSRIGNGMRSPLKLLGYDDSASHVEARYPAILFKQQLTACVEKIFGLIRDNLKKDLSPLLGSCIQAPKTGRVQGGKSSRSPGGLPQQSPVAQWDNIINFLDSLMSRLCANHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQSLTSNSFLLDDDMSIPFSAEDIDKAIPAINTDDIDLPAFLCEYPCAQFLILHK* 1522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0463 1521 Gene3D Kinesin motor domain 67 664 IPR036961 -
Gso6g0463 1521 ProSiteProfiles Dilute domain profile. 1165 1465 IPR002710 -
Gso6g0463 1521 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 Gene3D - 669 735 - -
Gso6g0463 1521 PANTHER PROTEIN OPAQUE1-LIKE 8 1518 - -
Gso6g0463 1521 SMART MYSc_2a 58 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 Gene3D Myosin VI head, motor domain, U50 subdomain 313 603 - -
Gso6g0463 1521 Coils Coil 977 1011 - -
Gso6g0463 1521 Coils Coil 1019 1053 - -
Gso6g0463 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Gso6g0463 1521 CDD MYSc_Myo11 78 722 IPR036018 -
Gso6g0463 1521 ProSiteProfiles Myosin motor domain profile. 64 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 Pfam DIL domain 1341 1444 IPR002710 -
Gso6g0463 1521 Gene3D - 835 884 - -
Gso6g0463 1521 Gene3D - 736 786 - -
Gso6g0463 1521 Gene3D - 787 834 - -
Gso6g0463 1521 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Gso6g0463 1521 SMART DIL_2 1340 1447 IPR002710 -
Gso6g0463 1521 Pfam Myosin head (motor domain) 66 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 Gene3D - 440 625 - -
Gso6g0463 1521 PANTHER MYOSIN 8 1518 - -
Gso6g0463 1521 Coils Coil 862 913 - -
Gso6g0463 1521 Gene3D - 254 311 - -
Gso6g0463 1521 CDD MyosinXI_CBD 1116 1488 IPR037975 GO:0007015
Gso6g0463 1521 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Gso6g0463 1521 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Gso6g0463 1521 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Gso6g0463 1521 Pfam IQ calmodulin-binding motif 811 828 IPR000048 GO:0005515
Gso6g0463 1521 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Gso6g0463 1521 Pfam Myosin N-terminal SH3-like domain 11 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso6g0463 1521 SMART iq_5 807 829 IPR000048 GO:0005515
Gso6g0463 1521 SMART iq_5 832 854 IPR000048 GO:0005515
Gso6g0463 1521 SMART iq_5 759 781 IPR000048 GO:0005515
Gso6g0463 1521 SMART iq_5 784 806 IPR000048 GO:0005515
Gso6g0463 1521 SMART iq_5 855 877 IPR000048 GO:0005515
Gso6g0463 1521 SMART iq_5 736 758 IPR000048 GO:0005515
Gso6g0463 1521 Coils Coil 953 973 - -
Gso6g0463 1521 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Gso6g0463 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 783 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0463 Gso-Chr6 4249785 4264801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0463 7 1518 Myosins gene family AT4G33200 73.364 0.0 2258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0463 K10357 - gmx:100796413 3016.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0482 4 4551581 4574323 Gso6g0463 6 4249785 4264801 GST
Gso6g0463 6 4249785 4264801 Gso14g0861 14 9670064 9700084 PCT