Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0451 ATGAATCTGCGTGAGAGCCCTCGTACTCAACAGAAACTTTCTCGGCAATCATCGAAGTCAAACAGAGGGGTGAAGCAAGAGGCAGCTGCTAGCCCTCTCTCGAGTGGATGCTGTCGAGGCTTGAGCAGCGTAAGGACTGTGTCATCCACCGCACCAACCTCGCAGCAACACGATCAGCTCCAACAGCGTTATGAAAAATTGGAAGCGAAGGTAGCAGGTTTGGAAAAAGAAGTGCAAAGGCAGACAGAACTTCGAGTCATGTATAGGAAAAGAATGGAAAGAACACAAGATTACTTAAAATACTGTCTCCAAATAGCACAGGAAAATGGAATCTTGGACCTCATTGTCCACTCCAAAGTTGAACTCTCACAGTCTCCCCTCTCTCTATATACCGCCAACTCCACTCCTCCCATCCCCACTCCTTCCCACCACCCCAATCTAACGGCCATCATTGATCAAGCCAAAATCAATGGATGGTATATCAACCCAAGTGAGATTGAGTTGGTAGAAAAAATAGGGCAAGGAACCACCGCAGACATTCACAAAGGGACATGGCGTGGATTTGATGTGGCGGTGAAGTGTATGTCCACTGCATTCTTCCGCACAAACGAAAACGGTGTCGTATTCTTCGCTCAGGAGCTCGAAACCCTCTCAAGGCAGCGCCACCGGTTCGTGCTCCACCTCATGGGTGCATGTCTTGAGCCTCCTCATCATGCATGGATAGTTACTGAGTATCTCAACACCACGCTCAAGGAGTGGCTACATGGGCCTGCCAAAAGGCCCAAAAACAGATCCGTCCCACTTCCTCCCTTCAAAGACAGACTCATACGGGCCTTGGAAACAGCCCAAGCCATGCAGTATCTCCACGACCAAAAGCCCAAAGTGGTTCACCGTGACTTGAAGCCCAGCAACATCTTCCTGGACGATGCATTGCATGTTAGGGTTGCGGATTTTGGACATGCACGGTTCTTGGGTGACGACGAAATGGCCCTCACCGGAGAAACAGGAACATACGTGTATATGGCTCCAGAGGTAATCAGATGTGAGCCCTATAATGAAAAATGTGATGTATACAGTTTTGGAATCATACTGAACGAGCTACTTACTGGAAAATACCCTTATATTGAGACACAATTTGGTCCCGCCAAGATTGCCATGGAAGTTGTGGAGGGCAAGCTAAGGCCTTTGCTTCCATCAAGGGACGATGGTGACCAACTGGGAGAGCTAATTGACTTAATATGTCTTTGCTGGGATGGAAATCCATCCACTCGACCATCCTTCGCAACAATTAGTCGTAGCCTCAAAAGCTATGCCAAGAGGGTCCTCCAAATTTCTAGTTAG 1341 0.4832 MNLRESPRTQQKLSRQSSKSNRGVKQEAAASPLSSGCCRGLSSVRTVSSTAPTSQQHDQLQQRYEKLEAKVAGLEKEVQRQTELRVMYRKRMERTQDYLKYCLQIAQENGILDLIVHSKVELSQSPLSLYTANSTPPIPTPSHHPNLTAIIDQAKINGWYINPSEIELVEKIGQGTTADIHKGTWRGFDVAVKCMSTAFFRTNENGVVFFAQELETLSRQRHRFVLHLMGACLEPPHHAWIVTEYLNTTLKEWLHGPAKRPKNRSVPLPPFKDRLIRALETAQAMQYLHDQKPKVVHRDLKPSNIFLDDALHVRVADFGHARFLGDDEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGKYPYIETQFGPAKIAMEVVEGKLRPLLPSRDDGDQLGELIDLICLCWDGNPSTRPSFATISRSLKSYAKRVLQISS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0451 446 MobiDBLite consensus disorder prediction 1 37 - -
Gso6g0451 446 SMART serkin_6 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0451 446 CDD STKc_MAP3K-like 172 434 - -
Gso6g0451 446 Gene3D Phosphorylase Kinase; domain 1 154 247 - -
Gso6g0451 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Gso6g0451 446 Gene3D Transferase(Phosphotransferase) domain 1 267 445 - -
Gso6g0451 446 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 441 - -
Gso6g0451 446 MobiDBLite consensus disorder prediction 1 28 - -
Gso6g0451 446 ProSiteProfiles Protein kinase domain profile. 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0451 446 PANTHER OS09G0443600 PROTEIN 26 441 - -
Gso6g0451 446 ProSitePatterns Protein kinases ATP-binding region signature. 172 193 IPR017441 GO:0005524
Gso6g0451 446 SUPERFAMILY Protein kinase-like (PK-like) 140 432 IPR011009 -
Gso6g0451 446 Pfam Protein kinase domain 167 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0451 446 Coils Coil 57 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0451 Gso-Chr6 4169203 4171825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0451 159 441 MAP Kinase Kinase Kinase AT2G17700 35.563 2.07e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Gso6g0451 Pkinase 9.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0451 - - gmx:100810435 895.19