Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0438 ATGGAGGAGATGTCAACCACGGTTACAGTGCCATTGAGAGTAGGTAATTCAGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCAAGAATTAAACTGATGTCAGATGCTGGGTTGTTATCCAATTCTATAACTAAGGTTTCCAATGAGACTTTTATAGGTTCAGATGAGGATCATGATGGTGGTCGTCATGAGGATGAAGTTGGTATTACAGCGGTCACAGCTCCAGAACAGCAAAGAGAAGGAGAAATTCCGATGTCGGATACAATATCCCAAAATATAAGCTCTCTGGTTGTTGGTGATGAAGTTTTAACCCCAGAAATTGAGGAGGATGATTTGATATCACTGGAAGGTGATCCAATTATTGATAGCTCTTCACTTTCAGTAGCCAGTGAGAATAGTAGTTTTTGTGGAGATGAGTTCATCAGTTCTGAGGTTTCTTCAGATTTAGGGACAACAAGTTCCATAGAGATAGGGAAGAGTGTCTCCACTGTCAAAATTGCTGCCAGGGCTACTGATTTGGGTGCGTCAAATGTAGAGGTTGATGTAGCAGTGAGCCTTGAAGAGACAGGGGTTAGATCTGGCCAAACGCCTACTACAGGTGTTTTTCATCAACTAACTCTGGAAAGATCTGTGAGTGGAACAGCTGGTAGAAGTGTTTTTGAATTAGATTGTACCCCGCTATGGGGATTTACTTCTGTGTGTGGAAAAAGACCTGAGATGGAAGACGCAGTTGCAACTGTACCTCGATTTTTGAAAATTCCTATTGAAATGCTAACTGGTGATAGATTACCTGATGGAATAAACAAATGTTTCAGTCAGCAGATAATACATTTCTTTGGAGTCTATGATGGGCATGGTGGCTCTCAGGTGGCAAAATATTGCCGGGAGCGCATGCATTTGGCCTTGGCTGAGGAAATAGAATCTGTCAAGGAAGGTCTATTAGTTGAAAATACCAAGGTTGATTGTCGAGATCTGTGGAAAAAAGCTTTCACCAATTGTTTTTTGAAGGTTGATTCTGAAGTTGGGGGGGGAGTTAATTGTGAGCCTGTTGCCCCAGAAACTGTTGGATCCACTTCTGTTGTTGCTATTATCTGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCGGTTCTATGTCGTGCCAAAGAACCCATGGCACTATCTGTTGATCATAAACCAAATCGAGATGATGAATATGCAAGAATTGAGGCTGCTGGAGGCAAGGTGATACAATGGAATGGCCACCGAGTATTTGGTGTTCTAGCAATGTCAAGGTCTATTGGTGATAGGTATTTGAAACCATGGATTATTCCGGACCCCGAGGTGACGTTTCTTCCTCGTGCAAAAGATGATGAGTGCCTCATTCTGGCCAGTGATGGCCTGTGGGATGTCATGACCAACGAAGAGGTGTGTGACATTGCTCGGCGGCGCTTACTTCTCTGGCACAAGAAAAATGGCTTGGCACTGCCCTCAGAAAGGGGAGAGGGAATTGATCCTGCTGCTCAAGCAGCTGCAGACTACCTATCGAACCGTGCTCTTCAGAAAGGAAGCAAAGACAACATCACTGTAATTGTGGTGGATTTGAAAGCTCAAAGGAAATTTAAGAGCAAGACATGA 1635 0.433 MEEMSTTVTVPLRVGNSVCDKPTIATHMDVSRIKLMSDAGLLSNSITKVSNETFIGSDEDHDGGRHEDEVGITAVTAPEQQREGEIPMSDTISQNISSLVVGDEVLTPEIEEDDLISLEGDPIIDSSSLSVASENSSFCGDEFISSEVSSDLGTTSSIEIGKSVSTVKIAARATDLGASNVEVDVAVSLEETGVRSGQTPTTGVFHQLTLERSVSGTAGRSVFELDCTPLWGFTSVCGKRPEMEDAVATVPRFLKIPIEMLTGDRLPDGINKCFSQQIIHFFGVYDGHGGSQVAKYCRERMHLALAEEIESVKEGLLVENTKVDCRDLWKKAFTNCFLKVDSEVGGGVNCEPVAPETVGSTSVVAIICSSHIIVSNCGDSRAVLCRAKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFLPRAKDDECLILASDGLWDVMTNEEVCDIARRRLLLWHKKNGLALPSERGEGIDPAAQAAADYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0438 544 SUPERFAMILY PP2C-like 226 535 IPR036457 -
Gso6g0438 544 SMART PP2C_4 220 532 IPR001932 -
Gso6g0438 544 CDD PP2Cc 232 534 IPR001932 -
Gso6g0438 544 PANTHER ALPHABET, ISOFORM E-RELATED 111 544 - -
Gso6g0438 544 Gene3D - 217 544 IPR036457 -
Gso6g0438 544 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 111 544 - -
Gso6g0438 544 Pfam Protein phosphatase 2C 259 527 IPR001932 -
Gso6g0438 544 ProSitePatterns PPM-type phosphatase domain signature. 281 289 IPR000222 GO:0043169
Gso6g0438 544 ProSiteProfiles PPM-type phosphatase domain profile. 230 534 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0438 Gso-Chr6 4068411 4074172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0438 1 544 PP2C-type Phosphatase Gene Family AT1G17550 48.925 2.39e-162 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0438 K14497 - gmx:100803321 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0459 4 4348946 4354412 Gso6g0438 6 4068411 4074172 GST