Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0429 ATGATGGGTGCCTCAGGAAAATGGGTAAAGGCATTAATCGGACTTAAGAAACCAGACAAAGAGGAGCATGTGAAAGAGGGTGGTGGTAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGACACGGGGGTTTCTTGGAAGGGTTTCAAAGGAGGAAACCACAGCGCGGTAGCTTCTTCTGAAGTGGGGTCTGATTCTTCTCCACATGTTGTAGCAGCAGCAGCAGCAACAGGCGCGGCTTTCACAGCAGCAGTAGCCACTGTGGTTCGAGCTCCACCTAAAGATTTCAGACTCGTCAAGCAAGAATGGGCCGCTATAAGAATCCAAACTGCTTTCCGCGCCCTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCTTGGTTCGTGTTCAGGCCCGAGTTAGAGCCCGTCGTGTCAGGATGTCCATAGAGGGCCAAACTGTGCAGAACTTGCTCAATGAAAGACGCAGTAAGCTTGATCTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACGTTGGAAGATGTTAAGACAAAGATACAAATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATGGCTTACTCTCTTGCTCACAAACAATGCAGATCAACACCAAGCCCTAATCCACGAACACGTGCCTCATTTACCTCTCTTAAGAGTCATGAGATGAACAAAGCTAACTGTGGGTGGAGTTGGTTGGAGCGTTGGATGGCAGCAAAGCCTTGGGAGAGTAGATTGATGGAACAATCACAATCTCAGGCTGAAGCCTTAGATAAAACCCCACCTCCAAAGAAGTTTGTGGAATCCTTTGTGAGCTCTAATTCCAAACAAAGCATGGTCAAAGTCAAGAAGAACAACGTCACAACAAGGATTTCAGCTAGGCCACCCCTTGTTGGGCAAGCTACTCGCTCATCCTCAAGTCCAAGTTCTGAGTTTCGATACGATGAGAGTTCTGCATCATCTTCCATTTGTACATCCACAACACCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGTAATGGTAATGCTGTTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCAAAAGACAAGTGGCAATCATGTATATAATAGAGCTCAGAGGCAGCAATCCATGGATGGGTTTCAATTCCTCAAGAGGGCAGCGGTTTTCTCCACTGCGGATTCTGACCCTTCAATCAACTTTTCTAGGCCACTTCACTTGGACAAGAGTTCAGTGATGGCACGGTGA 1353 0.4819 MMGASGKWVKALIGLKKPDKEEHVKEGGGKSKKWRLWRSSSGDTGVSWKGFKGGNHSAVASSEVGSDSSPHVVAAAAATGAAFTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRALLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQTVQNLLNERRSKLDLLKQAEEGWCDSRGTLEDVKTKIQMRQEGAFKRERAMAYSLAHKQCRSTPSPNPRTRASFTSLKSHEMNKANCGWSWLERWMAAKPWESRLMEQSQSQAEALDKTPPPKKFVESFVSSNSKQSMVKVKKNNVTTRISARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSNGNAVVARPNYMNLTQSTKAKQKTSGNHVYNRAQRQQSMDGFQFLKRAAVFSTADSDPSINFSRPLHLDKSSVMAR* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0429 450 PANTHER IQ-DOMAIN 5-RELATED 2 449 - -
Gso6g0429 450 MobiDBLite consensus disorder prediction 323 375 - -
Gso6g0429 450 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Gso6g0429 450 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Gso6g0429 450 Coils Coil 176 196 - -
Gso6g0429 450 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 2 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0429 Gso-Chr6 3975205 3977761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0429 2 440 IQD Protein Family AT2G26180 58.108 7.10e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0429 - - gmx:100782825 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0448 4 4232832 4235288 Gso6g0429 6 3975205 3977761 GST
Gso14g0853 14 9497857 9501043 Gso6g0429 6 3975205 3977761 PCT
Gso17g1928 17 38379214 38382403 Gso6g0429 6 3975205 3977761 PCT
Gso6g0429 6 3975205 3977761 Gso14g0853 14 9497857 9501043 PCT
Gso6g0429 6 3975205 3977761 Gso17g1928 17 38379214 38382403 PCT