Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0428 ATGGTATTCATGGATTATTTGGAATGGTTGCTTCCAATTCCAAGTGTCCCTTCTGCTTCAGCAATGTTCACCCTGCTTGCTTTAATAGGAGGATTGTTGGTTTATCTGTATGCACCCTATTGGGGTGTAAGGAAGGTTCCAGGCCCACCATCTCTGCCCCTTGTGGGACACCTTCCTTTGTTGGCTAAGTATGGTCCTGATGTGTTCTCAGTCCTTGCCAAACAATATGGTCCGATTTACAGATTCCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAGGAGGCTGGAATAAAAAAATTCAAAGACATTTCAAACAGAAGTATTCCCTCCCCAATTTCTGCTTCTCCTCTTCACCAAAAAGGCCTCTTCTTCAGCCGGGATTCACAATGGTCTATCATGCGAAACACTATATTATCAATGTACCAGCCATCATACTTGTCCAGATTAGTGCCAACAATGCAGTCCTTCATAGAATCCGCGACCCAAAACCTCGACTCTCAAAAAGAAGACATTATATTTTCCAACTTGTCCCTAAGACTAGCAACTGACGTGATTGGACATGCAGCATTTGGTGTTAACTTTGGCCTCTCTAGTCCCCATTCAGTTTGTGATTCCATCAAGAATGTTAATGTTAACAATAACAATAACAATGCAAGTGCTAGTAGTAGTAATAGTAATGATAATGAAGTATCAGATTTCATCAACCAACACATATACTCTACAACACAGCTTAAGATGGACTTGTCTGGTTCCTTGTCCATTATCTTGGGTCTGCTTTTGCCAATACTTCAAGAGCCATTTAGGCAGATTCTGAAGAGAATTCCTGGCACCATGGACTGGAAGATTGAGCATACCAACCAGAAACTAAGTGGTCGTCTTGATGAGATAGTGGAGAAGAGAATGAAAGACAAGACACGAAGTTCGAAGGATTTCTTGTCACTCATACTTAATGCCAGAGAAACAAAATCTGTTTCAGAGAATGTGTTCACACCTGAGTACATAAGTGCTGTTACTTACGAGCACTTACTTGCTGGCTCAGCAACCACGTCCTTTACTTTGTCTTCTGTTGTCTATTTGGTTGCTGGACACCCTGAAGTTGAGAAAAAGTTGCTTCATGAGATTGATGGGTTTGGTCCAGTGGATCAGATACCAACTTCTCAAGATCTTCATGACAAGTTTCCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGGGGCTATCTTCTTCCAAAGGGGACTTGGGTCTGGTTAGCACTTGGAGTTCCAGCAAAAGACCCCAGAAACTTTCCTGAGCCAGACAAGTTCAAACCGGAGAGGTTTGACCCCAACTTTGAAGAAATGAAACGAAGACATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGGGCATGCATTGGTAGACAATTTTCCCTGCAAGAGATCAAGCTTTCTCTGATTCATTTATATCGAAAATACTTGTTTCGGCATTCTCCCAATATGGAAAACCCCTTAGAACTCCAATATGGGATAGTCCTCAACTTCAAGCATGGGGTCAAGCTCAGAGCCATAAAAAGAAAAGAGGCTTGCTAA 1647 0.4177 MVFMDYLEWLLPIPSVPSASAMFTLLALIGGLLVYLYAPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDISNRSIPSPISASPLHQKGLFFSRDSQWSIMRNTILSMYQPSYLSRLVPTMQSFIESATQNLDSQKEDIIFSNLSLRLATDVIGHAAFGVNFGLSSPHSVCDSIKNVNVNNNNNNASASSSNSNDNEVSDFINQHIYSTTQLKMDLSGSLSIILGLLLPILQEPFRQILKRIPGTMDWKIEHTNQKLSGRLDEIVEKRMKDKTRSSKDFLSLILNARETKSVSENVFTPEYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVEKKLLHEIDGFGPVDQIPTSQDLHDKFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVPAKDPRNFPEPDKFKPERFDPNFEEMKRRHPYAFIPFGIGPRACIGRQFSLQEIKLSLIHLYRKYLFRHSPNMENPLELQYGIVLNFKHGVKLRAIKRKEAC* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0428 548 Gene3D Cytochrome P450 34 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 544 - -
Gso6g0428 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 483 492 IPR017972 GO:0005506|GO:0016705
Gso6g0428 548 PRINTS P450 superfamily signature 350 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS P450 superfamily signature 490 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 339 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 359 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 403 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 443 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 PANTHER THROMBOXANE-A SYNTHASE 15 544 - -
Gso6g0428 548 SUPERFAMILY Cytochrome P450 39 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0428 548 Pfam Cytochrome P450 47 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0428 Gso-Chr6 3965403 3975142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0428 84 544 Cytochrome P450 AT2G26170 72.668 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0428 K20771 - gmx:100808297 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0447 4 4225486 4232437 Gso6g0428 6 3965403 3975142 GST
Gso14g0852 14 9486321 9497758 Gso6g0428 6 3965403 3975142 PCT
Gso17g1929 17 38382413 38387985 Gso6g0428 6 3965403 3975142 PCT
Gso6g0428 6 3965403 3975142 Gso14g0852 14 9486321 9497758 PCT
Gso6g0428 6 3965403 3975142 Gso17g1929 17 38382413 38387985 PCT