Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0422 ATGACGACACTCTTCTTCATTTCGCCAACACGCTTCCTTTCCTTGATGCCATTCCTAGCATTCATCACCTCCAAATCCCAATTCCCAATCCTCTTCACTTTATTAATCGATTCTAGTTTCTCTCCTCATCCTACAACCACAACAAGCCTCCCCCCTCTTTTCCCCCAACAATTTTGTCTCACTCCCATGATTTTTACCGAGGATCTCTGGCCACTGCTCCAGCAACTCGTTGGAAAAACTCCTCTCTTCTCATCTTCATCATCAGCTTCGTCGTCCTTCTTCCAGAACCTTCGGGAATCGATGACGAACTCAAGTTGCGGAGGCGCGGAGTTGGAGCTATGCCGAGATGAATCAGCCGCATTGGTTCTCAAGTTCGTCGCCATCGCTTCCATTCTCCTCTCCGGCATGGCCGGGATCGCCATCCCGCTCATCGGAAAACACCGCCGCTTCCTCCGCACCGACGGCAACCTCTTCGTCGCTGCCAAGGCCTTCGCCGCCGGCGTCATTCTCGCCACCGGATTCGTGCACATGCTCTCCGACGCCACCAAGGCACTTCGCCACCCGTGCCTGCCAGCGTTCCCGTGGTCCAAGTTTCCCTTCACCGGTTTCTTCGCCATGTTGGCCGCGCTCCTCACGCTCCTCCTAGATTTCGTGGGAACGCAATACTACGAGCGCAAGCAGGGGATGAACCGCGCCCCCTCCGAAGAACCAGTACGGGTCGGCTCATCCGAACCCGGTGGGAATGGGAAGGTGTTTGGGGAAGAAGAAAGCGGCGGAATGCACATCGTGGGGATGCATGCACATGCTGCACATCATAGACATAACCATCCTCATGGCAATGATGCATGTCATGGCATTGGCAACATCAAGGAACAGGTCCACGCCCACTCCCACTCCCACTCCCACTCCCACGGACACTCCCACTCCCACATCGAAGATGGAGAAGATACTGACGTTCGACACGTCGTCGTTTCTCAGGTGTTGGAGCTTGGGATTGTATCACATTCTGTTATAATTGGGTTGTCCTTAGGAGTTTCGCAAAGTCCTTGTACCATAAGGCCATTAATTGCGGCGTTATCTTTTCATCAGTTTTTTGAAGGGTTTGCGCTTGGAGGTTGCATTTCCCAAGCGCAGTTTAAAGCCTCGTCAGCAACTATAATGGCTTGTTTTTTTGCACTGACTACACCCTTGGGTGTTGGGATTGGAATGGCTATCTCTTCGGGGTATAACCCTTACAGCCCCGGTGCACTCATCGCCGAAGGTATCTTGGATTCCTTGTCGTCGGGGATTTTGGTTTATATGGCTTTGGTAGATTTGATCGCTGCGGATTTTCTTAGCAAGAGGATGAGTTGTAACTTTAGGCTGCAGATACTGTCTTACTGCATGCTTTTCCTTGGGGCTGGATTGATGTCTTCGCTCGCAATTTGGGCATGA 1434 0.5209 MTTLFFISPTRFLSLMPFLAFITSKSQFPILFTLLIDSSFSPHPTTTTSLPPLFPQQFCLTPMIFTEDLWPLLQQLVGKTPLFSSSSSASSSFFQNLRESMTNSSCGGAELELCRDESAALVLKFVAIASILLSGMAGIAIPLIGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDATKALRHPCLPAFPWSKFPFTGFFAMLAALLTLLLDFVGTQYYERKQGMNRAPSEEPVRVGSSEPGGNGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGNDACHGIGNIKEQVHAHSHSHSHSHGHSHSHIEDGEDTDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVGIGMAISSGYNPYSPGALIAEGILDSLSSGILVYMALVDLIAADFLSKRMSCNFRLQILSYCMLFLGAGLMSSLAIWA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0422 477 MobiDBLite consensus disorder prediction 293 313 - -
Gso6g0422 477 PANTHER ZINC/IRON TRANSPORTER 101 477 - -
Gso6g0422 477 MobiDBLite consensus disorder prediction 228 248 - -
Gso6g0422 477 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 101 477 - -
Gso6g0422 477 Pfam ZIP Zinc transporter 123 474 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso6g0422 477 TIGRFAM zip: ZIP zinc/iron transport family 109 477 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0422 Gso-Chr6 3896940 3898997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0422 87 477 Inorganic Solute Cotransporters AT1G60960 66.832 4.58e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0422 K14709 - gmx:100812212 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1937 17 38520535 38524025 Gso6g0422 6 3896940 3898997 PCT
Gso6g0422 6 3896940 3898997 Gso17g1937 17 38520535 38524025 PCT