Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0412 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGGAGCCCCTGAAGAGGCTCGTGATGAAAATGTGTTAGTGTTTGAAGCAACCAAGGTTCTAAGTGGACTTTGCTCTGCTTACACTAAACAAGGTAGCAAAGGACTTAACCAAGATGCTGCCACTCTTTTTCAGGGTTATGGAACGGAAAACGCAGCATTTTGTGGCGTATTTGATGGGCATGGAAAGAATGGTCACATAGTAAGCAAAATAGTAAACAGCCGTTTGTCTCCGCTCATATTGAGCCAAAAGAAAGTGCATGCAAAGATTGACACGGTTCAAAAGGGTGATAAAATAAACCATGTGGACACAGATGAAGACAATTCATCAGCTCCAAACACGAATTGTCATGAATGGAAAGAGGCTATTCTTGATGCTTTCAGGGTGATGGAAAAGGAGCTCAAGCTACAAGAGAATATAGATTCCACTTGCAGTGGAACCACGGCTGTAGTTGTCATAAGACAGGGTGAAGATCTTGTCATAGCAAACCTTGGTGACTCGAGAGCAATCTTGGGGACAATCTCTGACGGTGAAATCATACCCATTCAATTGACAACGGATATGAAACCTGGATTACCTCGCGAGGCAGAACGAATAAGAAGTTGCAACGGTCGTGTATTTGCGCTGAAGGAAGAACCACACATCCAGAGAGTGTGGTTACCCAATGAGAACTCACCAGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTCAAAGACCATGGCATCATTGCCGTCCCAGATATTTCATATCGCACGCTGACATCCAGCGACCAGTTTGTTGTACTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACAAGGAGGTTTCCTCAGTTGTGTGGGAGGCAGACACTGAAAAAGATGCAGCAAGGGCAGTAGTGGAAGCAGCAACCGCAGCATGGAAACAAAAGTATCCTTCTTCTAAGGTAGATGACTGCACTGTGCTTTGCCTCTTCCTCCACAAGAAACCACAGTTTCTTGGTAACTAA 1032 0.4496 MGICISSESSAIHGAPEEARDENVLVFEATKVLSGLCSAYTKQGSKGLNQDAATLFQGYGTENAAFCGVFDGHGKNGHIVSKIVNSRLSPLILSQKKVHAKIDTVQKGDKINHVDTDEDNSSAPNTNCHEWKEAILDAFRVMEKELKLQENIDSTCSGTTAVVVIRQGEDLVIANLGDSRAILGTISDGEIIPIQLTTDMKPGLPREAERIRSCNGRVFALKEEPHIQRVWLPNENSPGLAMSRAFGDFMLKDHGIIAVPDISYRTLTSSDQFVVLASDGVWDVLSNKEVSSVVWEADTEKDAARAVVEAATAAWKQKYPSSKVDDCTVLCLFLHKKPQFLGN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0412 343 Gene3D - 24 337 IPR036457 -
Gso6g0412 343 CDD PP2Cc 37 334 IPR001932 -
Gso6g0412 343 SMART PP2C_4 26 332 IPR001932 -
Gso6g0412 343 PANTHER ALPHABET, ISOFORM E-RELATED 1 339 - -
Gso6g0412 343 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 339 - -
Gso6g0412 343 SUPERFAMILY PP2C-like 33 336 IPR036457 -
Gso6g0412 343 Pfam Protein phosphatase 2C 85 312 IPR001932 -
Gso6g0412 343 ProSiteProfiles PPM-type phosphatase domain profile. 36 334 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0412 Gso-Chr6 3847999 3849818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0412 1 339 PP2C-type Phosphatase Gene Family AT5G26010 51.576 8.25e-105 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0412 - - gmx:100795893 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1955 17 38727840 38732158 Gso6g0412 6 3847999 3849818 PCT
Gso6g0412 6 3847999 3849818 Gso17g1955 17 38727840 38732158 PCT