Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0385 ATGGCAAGTCCAGGATCGCACATTGTTGTCCTTGCGTTCGTGTTGCTCATTTCATCAAAACTTGCAGAATGTCACAACATAGTTCGCTTCCTTCCTGGCTTCCAGGGACCCCTTCCTTTTCTACTTGAAACTGGTTACGTGGAAGTGGGTGAAACTGAAGCAGAGGAGCACGCAGAACTCTTCTATTATTTTATCGAGTCAGAGAACGATCCTAAAGGGAACCCTCTCCTACTTTGGCTAACCGGGGGTCCCGGTTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATAGGTCCACTGACATTTAAAAACGAGGAATACAATGGGAGCCTACCTAATTTGACCTTGAAGCCACAATCATGGACAAAGGTAAGTAGCATTATATTTGTGGATCTGCCTGCGGGTACTGGCTTCTCTTATCCCAAAACAGAACGTGCTGTTCAGCAAAGTAGCTCTAAGCTTGTTCGCCATGCTCATCAATTTATTAGGAAGTGGCTAATTGATCATCCGGAATTTCTCTCAAATGAAGTCTACATTGCTGGTGACTCATACTGCGGCATTCCTGTCCCAGTTATTGTTCAAGAAATTTCAAATGGAAACGAAGGTGGTATGCAACCATGGATATACATCCAGTCACTGCAAAAGAATTGTAGAGGAGAGTATCGCAACATAGACCCAAGAAACGCGTTATGTCTAAGAGACATGCAATCGTACGAGGAGTCTCATGCATATGTCCTCTGTAGCTATTGGGCCAATGATGATAATGTTCGCAAAGCATTGCATGTTCGGAAGGGAAGTATAGGAAAATGGACGCGGTGTAACGATGACTTAAAATCTAAGTTTAATGCCGATATCCCTAGCAGCTTCCAATATCACGTAAATCTCAGCAGAAAAGGCTATCGTTCATTAATATACAGTGGGGATCATGACATGGTAGTTCCATTCTTGGCTACTCAAGCGTGGATAAGATCTTTAAACTATTCCATCGTATCTGACTGGAGGCAGTGGTATTACGATGGCCAAGTAGCAGGTTATACAAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGTGGAGGACATACAGCTCCCGAGTACAAACCTGAAGAATGTTTAGCCATGTTCAGTAGATGGATATCTAATATGCCATTGTAG 1158 0.4344 MASPGSHIVVLAFVLLISSKLAECHNIVRFLPGFQGPLPFLLETGYVEVGETEAEEHAELFYYFIESENDPKGNPLLLWLTGGPGCSAFSGLVFEIGPLTFKNEEYNGSLPNLTLKPQSWTKVSSIIFVDLPAGTGFSYPKTERAVQQSSSKLVRHAHQFIRKWLIDHPEFLSNEVYIAGDSYCGIPVPVIVQEISNGNEGGMQPWIYIQSLQKNCRGEYRNIDPRNALCLRDMQSYEESHAYVLCSYWANDDNVRKALHVRKGSIGKWTRCNDDLKSKFNADIPSSFQYHVNLSRKGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVSDWRQWYYDGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLAMFSRWISNMPL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0385 385 Pfam Serine carboxypeptidase 32 212 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 Pfam Serine carboxypeptidase 235 382 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 352 365 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 SUPERFAMILY alpha/beta-Hydrolases 28 384 IPR029058 -
Gso6g0385 385 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 240 383 - -
Gso6g0385 385 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 10 204 - -
Gso6g0385 385 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 210 240 - -
Gso6g0385 385 Gene3D alpha/beta hydrolase 38 211 IPR029058 -
Gso6g0385 385 Gene3D alpha/beta hydrolase 212 384 IPR029058 -
Gso6g0385 385 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 210 240 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 240 383 IPR001563 GO:0004185|GO:0006508
Gso6g0385 385 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 204 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0385 Gso-Chr6 3572327 3577941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0385 22 56 Calmodulin-binding Proteins AT2G22960 57.143 8.15e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0385 K16296 - gmx:100801015 762.296