Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0374 ATGGATGATGATCTTTCGTCCAGCCTTCTGTGCCATGAAAACGAAACGTGTTTGAAAGAAGGAGGTGAAGAGTTAGAATACCAATTCGCAGGATCACAGCATGATTGTGGGGTTTCGGAGGATGAACGTGTGGGAATTTTGATCGAGAGAGAGATCGTTCTTGGGTTCAAAAGGGACGAAAGTATGGTGTTTGGGGACTGGGTGAAACGCGCACGCGTGGAAGCAATCAATTGGATTCTCAAAAGTGAAAAGAGTTGGGCAATTCGGTTGCTGTCAATTGCATGCCTCTCTCTGGCTGCAAAGATGGAGGAATGCAATGTGCCAGGGCTATCAGAGTTCAAATTGGATGATTATTCCTTTGAGGGAAAAGTGATTCAGAAAATGGAGCTTTTGGTACTCAGCACGTTGGAGTGGGAAATGGGTATCATAACTCCCTTTGATTTTCTTTCCTATTTCATCACAAAGTTCTGCAAAGAATCCCCGCCAAGTCCTATTTTTTACAAGACCATGCAACTCATCTTCACCACAATGAAAGAGGTCAATTTAATGGATCACAAACCATCAGTTATTGCTGTGGCAGCTACTTTGGTGGCAATGGATCAACAATTAACGAGAGACGCGGTGGAGTTGAAGATGAGTTCAATTCCACAACATAGGCTTCTAGAATCTAAAGATGTATTTGAGTACTACAATCTAATTCAAAGATTATACGAGGAGAATACCAAAAGCGACACCCATACGCCAATTGAGATGACAGAGAGCTCTCGAGTTACTTCTTCTGCTGCAATGACAAAGAGAAGACGACTCACATTCAGTGATGATGAAGGAAGTAGTCATGGGAAGGGACCACCGGGCTAG 858 0.4336 MDDDLSSSLLCHENETCLKEGGEELEYQFAGSQHDCGVSEDERVGILIEREIVLGFKRDESMVFGDWVKRARVEAINWILKSEKSWAIRLLSIACLSLAAKMEECNVPGLSEFKLDDYSFEGKVIQKMELLVLSTLEWEMGIITPFDFLSYFITKFCKESPPSPIFYKTMQLIFTTMKEVNLMDHKPSVIAVAATLVAMDQQLTRDAVELKMSSIPQHRLLESKDVFEYYNLIQRLYEENTKSDTHTPIEMTESSRVTSSAAMTKRRRLTFSDDEGSSHGKGPPG* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0374 285 Pfam Cyclin, N-terminal domain 87 140 IPR006671 -
Gso6g0374 285 SUPERFAMILY Cyclin-like 126 215 IPR036915 -
Gso6g0374 285 MobiDBLite consensus disorder prediction 244 285 - -
Gso6g0374 285 Gene3D - 83 141 - -
Gso6g0374 285 Gene3D - 142 204 - -
Gso6g0374 285 PANTHER CYCLIN-D5-1 82 251 - -
Gso6g0374 285 SUPERFAMILY Cyclin-like 35 140 IPR036915 -
Gso6g0374 285 CDD CYCLIN 86 133 IPR013763 -
Gso6g0374 285 MobiDBLite consensus disorder prediction 247 266 - -
Gso6g0374 285 Pfam Cyclin, C-terminal domain 143 258 IPR004367 -
Gso6g0374 285 PANTHER CYCLINS 82 251 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0374 Gso-Chr6 3491798 3494252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0374 9 215 Core Cell Cycle Gene Families AT4G37630 31.707 1.66e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0374 K18811 - gmx:100798728 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0396 4 3607716 3610310 Gso6g0374 6 3491798 3494252 GST