LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso6g0357	ATGAGTGCTCCATCGCGAGAAGAGGAGTCGAAGGAGGAGGAGAGGGACGAGGAAGCGAACCGGCTTCTAGAAGAAGAAGAAGAAGCAGAATCATCATCAGAAGAGGGGGAGAAGATCCTGGTGGCGGATTTGGAGTTCGACAGGGTGGACGATGGGAGCGTTCCTCCTCCTTTCTCGTGGAAGAAGCTCTGGCTGTTCACGGGGCCTGGGTTCTTGATGAGCATAGCGTTTTTGGATCCAGGGAATCTAGAGGGGGATCTCCAGGCTGGGGCCATCGCGGGCTACTCGCTTCTATGGCTCCTCATGTGGGCCACCTTCATGGGCCTCTTGATCCAGCTTCTCTCCGCCAGGGTCGGCGTCGCCACGGGCCGCCACCTCGCCGAGCTCTGCAGGGACGAGTATCCCAATTGGGCCCGCCTCGTGCTCTGGTTCATGGCCGAGCTCGCCCTGATTGGCGCCGACATTCAAGAGGTTATTGGAAGTGCCATTGCCATCCAAATTCTCAGCCGCGGCTTCTTCCCTCTCTGGGCTGGAGTTCTAATCACTGCTTCAGATTGCTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCGGTTCTCATCGCTGTTATGGGTCTTTCTTTTGCCTGGATGTTCGGTGATGCTCAACCTAATAGAAAAGAGCTTTTAATGGGTATTTTGGTTCCAAGACTAAGCTCGAAAACAATTCGTCAGGCTGTGGGTGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTGCAATCAAGGAAGGTTGATCCTAAAAAGATAGGTCGGGTGCAGGAGGCTCTCAACTACTATTCAATTGAATCGGCGGCGGCACTTGCAGTCTCCTTCATGATCAATCTATTTGTCACAACAGTTTTTGCTAAGGGTTTTTATGGAACAAAACAGGCAGATAGCATAGGATTGGTCAATGCAGGGCAGTATCTTGAAGAGAAGTATGGGGGAGGAGTCTTCCCTATTCTTTATATATGGGGGATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATCACTGGCACATATGCTGGCCAATTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCGATTGTTTTTAATAAATCAGAAGGCTCATTGGATGTTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTCTAATTCCCCTCCTCACATTGGTCTCCAAAGAGAAGATCATGGGGACCTTTAGGGTTGGGCCTGTTCTTGAGAGAGTAGCATGGATTGTTGCTGGACTGATAATGATAATTAATGGATATCTCTTGTTAGATTTCTTCGTTTCTGAGGTGAATGGCATTTTGCTTGGTCTTTTAGCCTGCTCCTGCACAACAGCCTATATTGCATTCATTGTATATTTGGTTTCACAGAGCGGTATTCTTCCTTCTGCTTGGGTTAATCGTCTTCCCAAAGGATTTTCTTCTACTGGGAATTAA	1569	0.478	MSAPSREEESKEEERDEEANRLLEEEEEAESSSEEGEKILVADLEFDRVDDGSVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIAVMGLSFAWMFGDAQPNRKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPKKIGRVQEALNYYSIESAAALAVSFMINLFVTTVFAKGFYGTKQADSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNKSEGSLDVLNEWLNVLQSMQIPFALIPLLTLVSKEKIMGTFRVGPVLERVAWIVAGLIMIINGYLLLDFFVSEVNGILLGLLACSCTTAYIAFIVYLVSQSGILPSAWVNRLPKGFSSTGN*	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	142	168	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	172	191	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	197	218	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	246	269	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	353	372	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	381	398	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PRINTS	Natural resistance-associated macrophage protein signature	415	434	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PANTHER	BNAC08G04640D PROTEIN	24	511	-	-
	Gso6g0357	522	Hamap	Divalent metal cation transporter MntH [mntH].	49	471	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	MobiDBLite	consensus disorder prediction	1	36	-	-
	Gso6g0357	522	MobiDBLite	consensus disorder prediction	19	33	-	-
	Gso6g0357	522	TIGRFAM	nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family	61	439	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	Coils	Coil	6	35	-	-
	Gso6g0357	522	MobiDBLite	consensus disorder prediction	1	18	-	-
	Gso6g0357	522	Pfam	Natural resistance-associated macrophage protein	84	445	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Gso6g0357	522	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	24	511	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso6g0357	Gso-Chr6	3356100	3359849	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso6g0357	6	502	Inorganic Solute Cotransporters	AT1G47240	80.120	0.0	811

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso6g0357	K21398		-	gmx:100795013	975.311

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso4g0382	4	3493911	3497929	Gso6g0357	6	3356100	3359849	GST