Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0357 ATGAGTGCTCCATCGCGAGAAGAGGAGTCGAAGGAGGAGGAGAGGGACGAGGAAGCGAACCGGCTTCTAGAAGAAGAAGAAGAAGCAGAATCATCATCAGAAGAGGGGGAGAAGATCCTGGTGGCGGATTTGGAGTTCGACAGGGTGGACGATGGGAGCGTTCCTCCTCCTTTCTCGTGGAAGAAGCTCTGGCTGTTCACGGGGCCTGGGTTCTTGATGAGCATAGCGTTTTTGGATCCAGGGAATCTAGAGGGGGATCTCCAGGCTGGGGCCATCGCGGGCTACTCGCTTCTATGGCTCCTCATGTGGGCCACCTTCATGGGCCTCTTGATCCAGCTTCTCTCCGCCAGGGTCGGCGTCGCCACGGGCCGCCACCTCGCCGAGCTCTGCAGGGACGAGTATCCCAATTGGGCCCGCCTCGTGCTCTGGTTCATGGCCGAGCTCGCCCTGATTGGCGCCGACATTCAAGAGGTTATTGGAAGTGCCATTGCCATCCAAATTCTCAGCCGCGGCTTCTTCCCTCTCTGGGCTGGAGTTCTAATCACTGCTTCAGATTGCTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCGGTTCTCATCGCTGTTATGGGTCTTTCTTTTGCCTGGATGTTCGGTGATGCTCAACCTAATAGAAAAGAGCTTTTAATGGGTATTTTGGTTCCAAGACTAAGCTCGAAAACAATTCGTCAGGCTGTGGGTGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTGCAATCAAGGAAGGTTGATCCTAAAAAGATAGGTCGGGTGCAGGAGGCTCTCAACTACTATTCAATTGAATCGGCGGCGGCACTTGCAGTCTCCTTCATGATCAATCTATTTGTCACAACAGTTTTTGCTAAGGGTTTTTATGGAACAAAACAGGCAGATAGCATAGGATTGGTCAATGCAGGGCAGTATCTTGAAGAGAAGTATGGGGGAGGAGTCTTCCCTATTCTTTATATATGGGGGATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATCACTGGCACATATGCTGGCCAATTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCGATTGTTTTTAATAAATCAGAAGGCTCATTGGATGTTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTCTAATTCCCCTCCTCACATTGGTCTCCAAAGAGAAGATCATGGGGACCTTTAGGGTTGGGCCTGTTCTTGAGAGAGTAGCATGGATTGTTGCTGGACTGATAATGATAATTAATGGATATCTCTTGTTAGATTTCTTCGTTTCTGAGGTGAATGGCATTTTGCTTGGTCTTTTAGCCTGCTCCTGCACAACAGCCTATATTGCATTCATTGTATATTTGGTTTCACAGAGCGGTATTCTTCCTTCTGCTTGGGTTAATCGTCTTCCCAAAGGATTTTCTTCTACTGGGAATTAA 1569 0.478 MSAPSREEESKEEERDEEANRLLEEEEEAESSSEEGEKILVADLEFDRVDDGSVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIAVMGLSFAWMFGDAQPNRKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPKKIGRVQEALNYYSIESAAALAVSFMINLFVTTVFAKGFYGTKQADSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNKSEGSLDVLNEWLNVLQSMQIPFALIPLLTLVSKEKIMGTFRVGPVLERVAWIVAGLIMIINGYLLLDFFVSEVNGILLGLLACSCTTAYIAFIVYLVSQSGILPSAWVNRLPKGFSSTGN* 523
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 142 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 172 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 197 218 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 246 269 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 353 372 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 381 398 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PRINTS Natural resistance-associated macrophage protein signature 415 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PANTHER BNAC08G04640D PROTEIN 24 511 - -
Gso6g0357 522 Hamap Divalent metal cation transporter MntH [mntH]. 49 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 MobiDBLite consensus disorder prediction 1 36 - -
Gso6g0357 522 MobiDBLite consensus disorder prediction 19 33 - -
Gso6g0357 522 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 61 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 Coils Coil 6 35 - -
Gso6g0357 522 MobiDBLite consensus disorder prediction 1 18 - -
Gso6g0357 522 Pfam Natural resistance-associated macrophage protein 84 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0357 522 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 24 511 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso6g0357 Gso-Chr6 3356100 3359849 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0357 6 502 Inorganic Solute Cotransporters AT1G47240 80.120 0.0 811
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0357 K21398 - gmx:100795013 975.311
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0382 4 3493911 3497929 Gso6g0357 6 3356100 3359849 GST