Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0336 ATGATGAGTACCCATGTCGTTCGTCATGTTTCAGAATGCTTCGTCAAGCCACATTGTCCCGGCCAAGAGTCAAACCAAATATGCAACTTAACACCTTGGGATATTGCTATGCTGTCCGTCCACTACATCCAGAAGGGTCTGCTTTTCAAGAAGCCTCCAACAACACTTGTTGATCAACATGATTTCATTGAGAACCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCTGGTCGCCTTGTAACTCAGAAAACCCAAGACCCTCCCTCATATGCTGTGCTTGTTGATTGCAACAACAATAGTGATGGAGCTAGATTCATCTATGCAACATTGGACATGACCATATCTGACATAATCTCTCCCATTGACGTCCCACCCATTGTTCACTCATTGTTTGACCACCACAAAGCAGTCAACCATGATGGCCACACCATGCCATTGTTGTCCATCCAAGTCACTCAACTAGTGGATGCTGTTTTTATAGGTTGTTCCATGAACCACGTTATTGGCGATGGCACTTCTTATTGGAATTTCTTTAACACGTGGTCTGAGATTTTTCAAGCTCAAGCTGAAGGGCATGAATATGATGTTCCCATTTCACACAATCCTATTCATAATCGCTGGTTTCCAGAGCTTTACGGTCCATTAATCAATCTTCCCTTCAAAAACCACGACGAGTTTATTAGCAGATTTGAATCGCCCAAGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCGAAGCTGAAAGCAAAGGCGAACAAGGAGTGCAATACCACCAAAATCTCTTCGTTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCGCTCAGTACCACAGGAGCAGAGAACAAGTTGCAAGCTGGCCACAGACAATCGATCAAGAATGGAACCACCTCTGCCTAAGGAATACTTTGGAAACTCGCTTCATGCGGTGAGTGGTGAGGCCACGACAAGGGAGTTGCTTGAGAATGGTTTGGGATGGGCAGCATGGAAGTTGCACCTTGCTGTTGCAAACCATAATGCCAGTGCTGTTTTGGATTTTCTCAAAGTGTGGTTAGAATCTCCTTTCATATATCAAATTGGTGGTTTTTTTGACCCCTACTGTGTGATGATGGGTAGCTCGCCAAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGGAAAGCAGTGGCAGTTAGAAGTGGTTATGCCAACAAATTTGATGGCAAAGTGACATCATACCCTGGCCATGAAGGAGGGGGAAGCATTGATTTGGAAGTCTGTCTTTCACCGGATACAATGAGCGCGTTGGAATCAGACGACGAGTTCATGAGTGCAGTTTGCTAA 1371 0.4486 MMSTHVVRHVSECFVKPHCPGQESNQICNLTPWDIAMLSVHYIQKGLLFKKPPTTLVDQHDFIENLLEKLKHSLSLTLFHFYPLAGRLVTQKTQDPPSYAVLVDCNNNSDGARFIYATLDMTISDIISPIDVPPIVHSLFDHHKAVNHDGHTMPLLSIQVTQLVDAVFIGCSMNHVIGDGTSYWNFFNTWSEIFQAQAEGHEYDVPISHNPIHNRWFPELYGPLINLPFKNHDEFISRFESPKLRERIFHFSAESIAKLKAKANKECNTTKISSFQSLSALVWRSITRARSVPQEQRTSCKLATDNRSRMEPPLPKEYFGNSLHAVSGEATTRELLENGLGWAAWKLHLAVANHNASAVLDFLKVWLESPFIYQIGGFFDPYCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSIDLEVCLSPDTMSALESDDEFMSAVC* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0336 456 Pfam Transferase family 14 452 - -
Gso6g0336 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 454 - -
Gso6g0336 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 454 - -
Gso6g0336 456 Gene3D - 232 447 IPR023213 -
Gso6g0336 456 Gene3D - 2 225 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0336 Gso-Chr6 3126334 3129977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0336 68 446 Monolignol Biosynthesis Gene Families AT5G48930 28.212 3.80e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0336 - - gmx:100775661 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0352 4 3184589 3186232 Gso6g0336 6 3126334 3129977 GST