Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0335 ATGATTACCCCTGTCGTTCGACGCATTTCAGAATGCTTCGTCAAACCACATGGTTTAACCGAAATGTCAAACCAAACATGTCATTTAACCCATTGGGATATTGCTATGTTGTCTATGCACTATATCCAGAAGGGTCTACTCTTTAAGAAACCCACCCCACTTGTTGATCGACATGATTTCATTGGGAATCTGTTGGGAAAGCTCAAACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTAGCCGGTCGCCTTGTCACCCACCAAACCCAAAACCCTCCCTCTTACACTGTTTCCGTTGATTGCAAAAATAGTGATGGAGCCAGATTCATCTATGCAACTCTGGATATGACCATATCTGATATCCTCTCCCCAGTTGACATCCCACTCGTTGTTCAGTCATTGTTTGACCACCACAAAGCACTCAACCATGATGGCCACACCATGCCCCTGTTGTCCATCCAAGTCACTGAGCTAGTTGATGGTGTTTTCATAGGTTGTTCCATGAACCACTCTGTCGGTGATGGCACTTCTTATTGGAACTTTTTCAATACATGGTCTCACATCTTTCAAGCTCAAGCTCAAGGCCATGAAACTGATCTTCCCATTTCACACCGACCCATTCACAGTCGCTGGTTTCCTAATGATTGTGCTCCACCAATCAATCTTCCTTTCAAACACCATGACGAGTTTATCAGCAGATTTGAAGCACCCTTGATGAGGGAGAGAGTTTTCCAGTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCCAACATGGAGTCCAATACCACCAAAATCTCTTCGTTTCAATCCCTATCAGCCCATGTTTGGAGATCCATAACTCGTGCATGCTCCCTACCATATGAGCAAAGAACAAGTTGCAGGTTAACCGCAAACAGTCGAACAAGAATGGAACCACCTCTGCCTCAGGAATACTTTGGAAACTCAGTTAATAGAGTGAGTGCAGAAACAACAGTAGGGGAATTACTTGAGAATGATTTAGGATGGGCTGCATGGAAGTTGCACATGGCTGTTGCAAACCATAACAACAAAGTGGTGTTGCAATCACTCAAAGAGTGGTTACAGTCTCCTTTGATCTATCAAATTGGTCAAGCCATGGACCCGTACGTTGTGTTGATAAGTAGCTCACCCAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGAAAAGCAGTGGCGGCAAGAAGTGGATATGCGAACAAATTTGATGGAAAAGTGACATCATACCCAGGTCGTGAAGGAGGGGGAAGCATCGATTTGGAAGTGGGCCTTTTACCACATATAATGAGCGCTCTTGAATCAGACAGGGAGTTTATGAATGCTGTTTCGGTTTCCAATCTCTGA 1374 0.4425 MITPVVRRISECFVKPHGLTEMSNQTCHLTHWDIAMLSMHYIQKGLLFKKPTPLVDRHDFIGNLLGKLKHSLSLTLSHFYPLAGRLVTHQTQNPPSYTVSVDCKNSDGARFIYATLDMTISDILSPVDIPLVVQSLFDHHKALNHDGHTMPLLSIQVTELVDGVFIGCSMNHSVGDGTSYWNFFNTWSHIFQAQAQGHETDLPISHRPIHSRWFPNDCAPPINLPFKHHDEFISRFEAPLMRERVFQFSAESIAKLKAKANMESNTTKISSFQSLSAHVWRSITRACSLPYEQRTSCRLTANSRTRMEPPLPQEYFGNSVNRVSAETTVGELLENDLGWAAWKLHMAVANHNNKVVLQSLKEWLQSPLIYQIGQAMDPYVVLISSSPRFNMYGNEFGMGKAVAARSGYANKFDGKVTSYPGREGGGSIDLEVGLLPHIMSALESDREFMNAVSVSNL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0335 457 Pfam Transferase family 13 449 - -
Gso6g0335 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 452 - -
Gso6g0335 457 Gene3D - 8 222 IPR023213 -
Gso6g0335 457 Gene3D - 233 444 IPR023213 -
Gso6g0335 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0335 Gso-Chr6 3116811 3118505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0335 68 443 Monolignol Biosynthesis Gene Families AT5G48930 27.525 7.11e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0335 - - gmx:100787276 923.694