Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0322 ATGCATGTGGTTGTGGTGAAAGAGGCAAATTTGAGCACGGGAATAGGAGCAGATAATCAGAAAACAATGGCCGTAGCAATAGGAAGAAGCTTCTCCATTCAGCCCGGCTCTTTATTCAACAACAAGAGCTTGGATAGAGGTTCACCAGCTGGAAGATTATCGTGGCTTGGGGATGGTGCTGCTGCCACTCCACGTTATAGGCAAACTTGTGTTGGGGCGCAACAGCGACCTACATGGCTCCCAGGACTTGATCCCCCACCTCATCTTGATGGAACTCTTGCTGGAGATTTTGGGTTCGACCCACTTGGACTTGCAGAGGATCCGGCAAGCTTAAGGTGGTATGTGCAGGCAGAGCTGGTTCATTGTCGCTTTGCAATGCTTGGGGTCTTCGGAATTCTAGTGACAGATCTACTTCGCGTCACAGGAATTAGTAAGATACCGGTTTGGTTTGAAGCTGGTGCGGTAAAATACGACTTTGCCAATACAAAGACACTCTTCCTTGTTCAACTAGTTCTGATGGGGTTTGTGGAAACTAAAAGGTATATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGGTCCTTCTTTGGATTGGAAGCTTCACTGAAAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGATATTAATAACGCTCATGACTGGAAGCTTAAAGAGATTAAGAATGGGCGACTCGCAATGGTGGCAATGCTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAATCTTGTGGAGCATCTTTCCAATCCATGGCATAAAACAATTATTCAGACCCTTGCCAATTCTAGCTCTTAG 858 0.4639 MHVVVVKEANLSTGIGADNQKTMAVAIGRSFSIQPGSLFNNKSLDRGSPAGRLSWLGDGAAATPRYRQTCVGAQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGILVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETKRYMDFVSPGSQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0322 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 281 IPR001344 GO:0009765|GO:0016020
Gso6g0322 285 Pfam Chlorophyll A-B binding protein 85 253 IPR022796 -
Gso6g0322 285 Gene3D Chlorophyll a/b binding protein domain 78 285 - -
Gso6g0322 285 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 23 281 - -
Gso6g0322 285 SUPERFAMILY Chlorophyll a-b binding protein 72 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0322 Gso-Chr6 2994842 2996628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0322 60 280 Chloroplast and Mitochondria Gene Families AT3G61470 46.188 4.47e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0322 K08911 - gmx:100804934 551.977