Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g0298 | ATGGCTATTCGTGTAACTTTTTCCTTTTCGGGCTACGTCGCCCAGAGCCTCGCCTCCTCCGCCGGCGTGCGCGTCGCCAATTCGCGATGTGTCCAGGAATGCTGGATCCGCACGCGCCTCTTCGGGGGCGCCACCCAGAAGACGGATCTAGATTCCTCCGCCGGCGGCGGAGTCCGCAATTTCGCCAGGCCCAACTGCTGGGCCCAGTCCACTTACTCGAGCCTCGCCGGGGAATTTCTCGGCGACGGCTGCAGCAAGAGCCCAATCATCTTGGGCCTGATTTCGATCATGAAGTCAACGGTGGGTGTGTCTGGGTCATCCGCGGCGGCTGCGGGTATTTTCGGTATTTCGCCATTTAAAACCACTTCGATTATTCCCTTCTTGCCAGGTTCGAAGTGGCTTCCTTGCAACGAGTCCGTTCCCGACCCCACCTCCTGGGAGGTCGACAAAGGTGGCACGCGACGCGTCGTTTCGGAAACAGAATCGAATTTTGCCAAGATTAGTTGGCTTTCGCGGTTGATGAACGTGTGTTCCGAAGACGCGAAGGCTGCGTTCACTGCTCTTACCGTTAGTTTACTCTTTAAATCGTCCTTGGCTGAACCCAGATCAATTCCCTCCTCTTCTATGTACCCTACTCTTGAAGTAGGTGACCGTGTTCTTACCGAGAAGGTTTCGTTCTTCTTTAGAAAGCCTGATGTTTCGGATATAGTCATTTTCAAAGCTCCTCCTTGGTTAGAGGAGTTTGGTTTTAGTTCGTCTGATGTATTTATAAAGAGGATTGTGGCTAAGGCTGGGGACACTGTTGAGGTGCGTGATGGGAAACTACTGATAAATGGTGCTGCTGAAGAACAAGAATTTGTATTAGAGGCTCTAGCTTATGAGATGGATCCAATGGTTGTGCCAGAAGGATATGTGTTTGTAATGGGCGACAATCGGAATAAAAGCTTTGATTCTCATAACTGGGGTCCCCTGCCGGTTGAGAACATTGTTGGTAGGTCCATGTTTCGGTACTGGCCTCCATCCAAGGCATCTGACACTGATACCCATCGTAAACTCCCACCTGGTAACAAACCTGTGGCAATTTCTTGA | 1089 | 0.5133 | MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLFGGATQKTDLDSSAGGGVRNFARPNCWAQSTYSSLAGEFLGDGCSKSPIILGLISIMKSTVGVSGSSAAAAGIFGISPFKTTSIIPFLPGSKWLPCNESVPDPTSWEVDKGGTRRVVSETESNFAKISWLSRLMNVCSEDAKAAFTALTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKVSFFFRKPDVSDIVIFKAPPWLEEFGFSSSDVFIKRIVAKAGDTVEVRDGKLLINGAAEEQEFVLEALAYEMDPMVVPEGYVFVMGDNRNKSFDSHNWGPLPVENIVGRSMFRYWPPSKASDTDTHRKLPPGNKPVAIS* | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g0298 | 362 | Pfam | Signal peptidase, peptidase S26 | 181 | 338 | IPR019533 | GO:0004252|GO:0006465 | |
Gso6g0298 | 362 | SUPERFAMILY | LexA/Signal peptidase | 198 | 343 | IPR036286 | - | |
Gso6g0298 | 362 | MobiDBLite | consensus disorder prediction | 341 | 362 | - | - | |
Gso6g0298 | 362 | Gene3D | Umud Fragment, subunit A | 194 | 352 | - | - | |
Gso6g0298 | 362 | PANTHER | SIGNAL PEPTIDASE I | 1 | 347 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Gso6g0298 | 362 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 197 | 213 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Gso6g0298 | 362 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 256 | 268 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Gso6g0298 | 362 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 300 | 319 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Gso6g0298 | 362 | CDD | S26_SPase_I | 200 | 332 | IPR019533 | GO:0004252|GO:0006465 | |
Gso6g0298 | 362 | ProSitePatterns | Signal peptidases I serine active site. | 206 | 213 | IPR019756 | GO:0004252|GO:0016021 | |
Gso6g0298 | 362 | PANTHER | THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED | 1 | 347 | - | - | |
Gso6g0298 | 362 | TIGRFAM | sigpep_I_bact: signal peptidase I | 183 | 339 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Gso6g0298 | 362 | ProSitePatterns | Signal peptidases I signature 3. | 305 | 318 | IPR019758 | GO:0004252|GO:0016021 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g0298 | Gso-Chr6 | 2770070 | 2772658 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g0298 | 209 | 339 | MADS-box Gene Family | AT1G29960 | 32.331 | 3.52e-13 | 63.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g0298 | K03100 | - | gmx:100802457 | 709.909 |