Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0293 ATGGACGCAGCAACGGGTGTTGGAGTTTGTGTCTTCCTATTAATTTCTTACATGGCGTTCTTAATCAAACGGGCTACAGCAGGTTCTGCTCGCAAGCCACCGGCAGCATCCGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTGGGTGGCTCCGGTCAGCCTCTTTACGAAACCCTAGGAACGTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATTGGTGTTCACCCTGCCGTTGTGGTGAGCTCTTGGGAATTAGCAAAAGAGTGTTTCACCACTCTTGACGTCACTGTCTCCTCTCGTCCCAAATTCACCGCCGCAAAAATCTTGACATACAACTATGCTAGTTTCGCGTTCGCCCCATACGGAGATTTCTGGCGCGATATGCACAAGATTACGGTTTCAGAGCTACTCTCCACTCGCCAGGCTGAAATGCTTCGAGGTATTAGAGATTCCGAGGTAAAGAGCTCGTTGAGAGAACTACAGAGAGCGTGGGCGGAGAAAAGAGGCGTGTCCTCTGGTGATTTGTTGGTGGAGATGAAGCAGTGGTTTGGAGAAATGAATCTGAACGTGATTCTGAGGATGGTTGCTGGAAAGCGATACTGTGTGGGGAGTGTAGATCAGGAACAGGCAAGGCGAGTTCGGGGGGTGCTGAGAGACTTCTTTCATTTGATGGGGTCGCTTGTGATTGGGGACGCGATTCCCTTTCTTGGGTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAAAAAGACGGCTGTAGAAATAGATAACATCGTTTCTGAATGGTTAGAAGAACATAAGCAGCTGAGAAGAGATTCAAGTGAGGCCAAAACAGAGCAAGACTTCATGGGTGCGTTGCTGTCTGCACTTGACGGTGTCGACCTTGCTGGTTATGATGCTGACACTGTCATAAAAGCCACATGCTCAACGCTAATTGCTGCGGCAACGGATACTACAACTGTTACCATGATTTGGACACTATCGTTATTGTTGAATAATCGTCACGCCTTAAACAAAGTTCAAGATGAATTGGATGAGCATGTGGGCAAGGGAAGACTAGTGAATGAATCTGATATTAACAAATTAATATACCTTCAAGCCGTAGTTAAAGAAACGATGAGGTTGTATGCAGCTGCACCACTTCCAGGTCCACGTGAATTCACAAGTGAGTGTACCTTAGGTGGCTACCGTATCCAAGCAGGTACCAGATTTATTTTGAACATTTGGAAGATGCAGAGAGACCCACGTGTATGGTCAGACCCATTAGAATTTCAACCAGAAAGGTTCCTCACGAACCACAAGGGTGTGGATGTAAAAGGTCAACATTTTGAGCTACTTCCCTTTGGTGGTGGAAGAAGGTCTTGTCCTGGCATGTCATTTGCCCTTCAAATGACATACTTGGCATTAGCAACTTTTTTGCAGGCATTTGAAGTCACAACCTTGAACAATGAAAATGTTGACATGAGTGCCACATTTGGACTCACACTTATTAAAACCACACCACTAGAGGTTTTAGCCAAACCTCGTTTACCATATCAACTTTTCTTCACTGATGAAACTAAGGAAAATCCAACACATTCACCATGA 1596 0.4599 MDAATGVGVCVFLLISYMAFLIKRATAGSARKPPAASGGWPLIGHLHLLGGSGQPLYETLGTLADKYGPIFSIRIGVHPAVVVSSWELAKECFTTLDVTVSSRPKFTAAKILTYNYASFAFAPYGDFWRDMHKITVSELLSTRQAEMLRGIRDSEVKSSLRELQRAWAEKRGVSSGDLLVEMKQWFGEMNLNVILRMVAGKRYCVGSVDQEQARRVRGVLRDFFHLMGSLVIGDAIPFLGWLDLGGEVKEMKKTAVEIDNIVSEWLEEHKQLRRDSSEAKTEQDFMGALLSALDGVDLAGYDADTVIKATCSTLIAAATDTTTVTMIWTLSLLLNNRHALNKVQDELDEHVGKGRLVNESDINKLIYLQAVVKETMRLYAAAPLPGPREFTSECTLGGYRIQAGTRFILNIWKMQRDPRVWSDPLEFQPERFLTNHKGVDVKGQHFELLPFGGGRRSCPGMSFALQMTYLALATFLQAFEVTTLNNENVDMSATFGLTLIKTTPLEVLAKPRLPYQLFFTDETKENPTHSP* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0293 531 Coils Coil 262 282 - -
Gso6g0293 531 Gene3D Cytochrome P450 22 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 SUPERFAMILY Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 Pfam Cytochrome P450 38 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0293 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gso6g0293 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 518 - -
Gso6g0293 531 PANTHER CYTOCHROME P450 82C3-RELATED 7 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0293 Gso-Chr6 2728691 2732239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0293 7 518 Cytochrome P450 AT4G31940 48.654 5.16e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0293 - - gmx:100779080 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0310 4 2805930 2808049 Gso6g0293 6 2728691 2732239 GST