Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0292 ATGATAATCCATTATCAAAATCAATCATACCCAACAACATCCTCCGACACCATGTTGCACATGGAAAACCCCCTCCTGCAGTCAACAAACTCAATTACCTTCACATTCTTTGGGCTGTTGTTATTTCTCTTTGTTCTTTCATCCATATTCAGAAACCGCGGTGCTGCAACAAGAAAAGCACCACCAGAAGCAAGAGGCGCGTGGCCTTTAATTGGTCACATCCACCTCTTAGGTGGCTCAAAACCACCCCATGTCACGTTGGGCCACATGGCGGACAAATATGGTCCCGTCTTCACCTTGCGTCTGGGTGCTCACAAAACGTTGGTTGTGAGCAATTGGGAAATGGCCAAACAGTGCTTTACCGTCAACGACAAAGCGTTTGCTAGCCGTCCTAAATCAGTGTCCTTTGAATTGTTGGGATACAACTATTCCATGATTGGGTTCATCCCTTACGGTTCTTATTGGCGTCACGTGCGCAAAATTATCACGCTGGAGCTTCTCTCTACTCACTGCATAGACATGCTCAAGCACGTGATGGTGGCCGAGGTTAAGGCGGCAGTGAAAGAGACTTACAAGAACCTAAAGGGTTCCGAAAAGGCAACAACTGAAATGAAGAGGTGGTTCGGGGACATAACGTTAAACGTTATGTTCAGAACGGTGGTAGGAAAACGTTTTGTTGGTGAGAATGAAGAGAACGAACGGATCCGAAAGGCGCTGAGAGAATTTTTTGACCTGACGGGGGCGTTCAATGTGTCTGATGCTCTTCCTTATTTGAGATGGTTGGATTTGGATGGTGCAGAGAAGAAAATGAAAAAGACGGCGAAAGAGTTAGATGGGTTTGTTCAAGTTTGGCTGGAAGAACACAAAAGTAAAAGGAATAGTGAAGCTGAACCCAAAAGTAACCAGGACTTGATGGACGTGCTTCTTAGCCTTGTTGAGGAGGGTCAAGAGTTTGACGGCCAGGATGCTGACACCACAATCAAAGCTACTTGCCTGGGCTTAATTTTAGCTGGCTCTGATACGACAACAACAACATTGTCTTGGGCTCTCTCATTACTTCTCAATAATCGTGAAGTCCTAAATAAGGCAATCCACGAATTAGACACACAAATTGGGAGTGAAAAAATTGTAGAGATATCAGACTTAAAAAAGCTAGAATATCTCCAATCTATCATCAAGGAAACATTACGTTTGTACCCAGCTGCACCACTTAATGTGCCACACGAGTCCTTAGAAGATTGCACCGTGGGTGGATATCATGTACCAACTGGCACGCGTCTGTTGACTAATATTTCAAAACTTCAACGAGACCCTTCATTATACCCTAATCCATTAGAATTTTGGCCAGAGAGATTCTTGACAACCCACAAGGATGTAGACATCAAAGGTCAACATTTTGAATTAATTCCATTTGGTGCAGGTAGAAGAATGTGCCCTGGACTTTCTTTCGGTCTTCAAGTAATGCAACTAACGCTTGCTACTCTATTGCATGGGTTTGACATTGTAACTAGTGATGGGGAACATGTCGATATGCTTGAACAAATTGGACTAACCAACATTAAGGCCTCTCCACTCCAAGTCATTCTTACACCACGTCTTTCTGGTCATATTTATGATGAAATTTAA 1626 0.4354 MIIHYQNQSYPTTSSDTMLHMENPLLQSTNSITFTFFGLLLFLFVLSSIFRNRGAATRKAPPEARGAWPLIGHIHLLGGSKPPHVTLGHMADKYGPVFTLRLGAHKTLVVSNWEMAKQCFTVNDKAFASRPKSVSFELLGYNYSMIGFIPYGSYWRHVRKIITLELLSTHCIDMLKHVMVAEVKAAVKETYKNLKGSEKATTEMKRWFGDITLNVMFRTVVGKRFVGENEENERIRKALREFFDLTGAFNVSDALPYLRWLDLDGAEKKMKKTAKELDGFVQVWLEEHKSKRNSEAEPKSNQDLMDVLLSLVEEGQEFDGQDADTTIKATCLGLILAGSDTTTTTLSWALSLLLNNREVLNKAIHELDTQIGSEKIVEISDLKKLEYLQSIIKETLRLYPAAPLNVPHESLEDCTVGGYHVPTGTRLLTNISKLQRDPSLYPNPLEFWPERFLTTHKDVDIKGQHFELIPFGAGRRMCPGLSFGLQVMQLTLATLLHGFDIVTSDGEHVDMLEQIGLTNIKASPLQVILTPRLSGHIYDEI* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0292 541 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 Pfam Cytochrome P450 62 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Gso6g0292 541 Gene3D Cytochrome P450 46 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PANTHER CYTOCHROME P450 82C3-RELATED 58 538 - -
Gso6g0292 541 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g0292 541 PANTHER CYTOCHROME P450 58 538 - -
Gso6g0292 541 SUPERFAMILY Cytochrome P450 61 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0292 Gso-Chr6 2722044 2726179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0292 36 538 Cytochrome P450 AT4G31940 48.649 4.97e-178 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0292 - - gmx:100787630 1058.9