Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0290 ATGATCACTAAAAAAAAACAAGAACAACTTCTTTTGTTCATCATCATCTTTGTTTTGGGGAAAATAACATTTTTCATTCCAACAACGAATGCCCAAGTGAACCACCACGAGTGCCGCCAAACATGCGGTTCCTCCAAACCCGTCCCTTACCCATTCGGATTCTCCTCCGGCTGCGCAATACGCCTGAAATGCACCGCCGGCGTGGCCTCCGTCGGAGAATTCCCGGTCAAAGTCAACACAGACAGCATGATCGTGAGCATTGAAGCTCAATGCAATCGCCCATTCGATAGCCTCCACCATCTGTTCAGCCACAAATACGCACCCACTTCGCGAAACGTGATCCTCTTAGAGAACTGCACCGGAACGCCTTTACCTTGCTTCATACCGGAGACTCTGGTCCGGACCCACTTCGAATCCGTGGGTTGCAACAACGCCTCCGGCACCGGCGAATTGAGCTGCTACTTCGAGAACAGAACCAACGGATTCGTAGATCGTAGAACGTTGGATGAAATTGGATGCAAGTACTTTATGTCGTCCCTTGCAGCGCCAGATATCAAAAACATTTCCGGTGCGCCTTTGTCTTTGGATGTAAATATAATCCAACTTGGATGGTGGCTTCAGGGAGATCAGTGTTTATGTTCTGATCATGCCAATTGTACCACGCTTCAGTCTCCGATGGATGGAAAGCCCGGGTTCCGGTGTCGCTGCCGCGACGGGTTCGTCGGCGATGGGTTTTTGGCCGGAACTGGTTGCCGGAAAGCCTCGTCATGCAACCCAGCGAAGTACATATCTGGTCGATGTGGAGGAACAACGAGATTCATTGTCTTAATTGGAGGGTTCGTTGTGGGTGTTTCGCTGATGGTTACTTTGGGTTCATTGTGTTGTTTCTATCGCCGACGCTCCAAATTGAGAGTCACAAATAGCACGAAAAGGCGCTTAACCGAAGCCACCGGCAAAAATAGCGTTCCTATCTATCCCTACAAAGACATTGAGAAAGCCACAAATAGTTTCTCCGAGAAGCAACGGCTTGGAACGGGAGCATACGGGACTGTTTATGCTGGGAAACTCTACAACAATGAATGGGTTGCCATTAAAAGGATAAAACACAGAGACACTGATAGTATTGAGCAAGTAATGAATGAGATCAAGCTCCTTTCTTCAGTGAGCCACACCAATTTAGTTCGTTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATCCTAGTGTATGAGTTCATGCCCAATGGAACACTGAGTCAGCACTTGCAGAAGGAGAGGGGGAGTGGTCTTCCTTGGCCAATTCGACTCACGATTGCCACTGAAACTGCACAAGCCATAGCATATCTTCATTCAGCCATTTGTCCCCCCATTTACCACAGGGACATCAAGTCCAGTAACATACTTTTGGACTACAATTTCAGGTCCAAAGTGGCAGATTTCGGTCTTTCTAGACTAGGGATGACCGAAATATCCCACATTTCGACAACCCCACAAGGAACCCCCGGCTACGTTGATCCACAGTACCATCAAGACTTTCACCTCTCTGACAAGAGTGATGTATATAGCTTGGGTGTTGTTCTTGTTGAGATCATAACAGGATTGAAAGTGGTGGACTTTTCACGTCCGCATAATGAAGTGAATCTAGCTTCTCTTGCTGCGGACAAGATCGGGAAAGGGCTTTTAAATGAAATTATAGACCCATTCCTTGAACCTGAAGTAAGAAGTGATGCTTGGACCCTTTCATCCATACACAAGGTGGCTGAGCTCGCATTCAGATGCATTGCGTTCCATAGGGACATGAGGCCTTCAATGACAGAAGTGGCTTCAGAGTTAGAGCAGCTTAGGTTGAGTAGGTGGACTACATTGGGAGACAACAATTGTGCAACCTCGACGGAATTGTCCTCCTGTTCTTCCTCGTCAAATGAATGTGAGAAACCACTAAGCATTGCAACGAGGAATTTTGGGGCAAAGGGTAAAGGCCACCTCAAGCTCCAAACTGGGCCTATTAATTTAAAGTCATTACAAAGGCCCAATAGTAACTCACCAGTCTCGGTGCAAGACCAAGACTTGTGGTTGAGTGAGCAGAGCTCTCCTTCGTCAAGTAGTTTTCCAAGCAAGTCATTTGATTGA 2130 0.4714 MITKKKQEQLLLFIIIFVLGKITFFIPTTNAQVNHHECRQTCGSSKPVPYPFGFSSGCAIRLKCTAGVASVGEFPVKVNTDSMIVSIEAQCNRPFDSLHHLFSHKYAPTSRNVILLENCTGTPLPCFIPETLVRTHFESVGCNNASGTGELSCYFENRTNGFVDRRTLDEIGCKYFMSSLAAPDIKNISGAPLSLDVNIIQLGWWLQGDQCLCSDHANCTTLQSPMDGKPGFRCRCRDGFVGDGFLAGTGCRKASSCNPAKYISGRCGGTTRFIVLIGGFVVGVSLMVTLGSLCCFYRRRSKLRVTNSTKRRLTEATGKNSVPIYPYKDIEKATNSFSEKQRLGTGAYGTVYAGKLYNNEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQKERGSGLPWPIRLTIATETAQAIAYLHSAICPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTEISHISTTPQGTPGYVDPQYHQDFHLSDKSDVYSLGVVLVEIITGLKVVDFSRPHNEVNLASLAADKIGKGLLNEIIDPFLEPEVRSDAWTLSSIHKVAELAFRCIAFHRDMRPSMTEVASELEQLRLSRWTTLGDNNCATSTELSSCSSSSNECEKPLSIATRNFGAKGKGHLKLQTGPINLKSLQRPNSNSPVSVQDQDLWLSEQSSPSSSSFPSKSFD* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0290 709 MobiDBLite consensus disorder prediction 671 709 - -
Gso6g0290 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 655 IPR045274 GO:0007166
Gso6g0290 709 Gene3D Laminin 212 246 - -
Gso6g0290 709 Pfam Protein kinase domain 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0290 709 ProSiteProfiles Protein kinase domain profile. 337 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0290 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Gso6g0290 709 SUPERFAMILY Protein kinase-like (PK-like) 315 612 IPR011009 -
Gso6g0290 709 CDD STKc_IRAK 343 614 - -
Gso6g0290 709 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Gso6g0290 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 29 655 - -
Gso6g0290 709 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Gso6g0290 709 SMART serkin_6 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0290 709 Gene3D Transferase(Phosphotransferase) domain 1 413 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0290 Gso-Chr6 2706716 2712602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0290 11 703 Receptor kinase-like Gene Family AT2G23450 51.416 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso6g0290 Pkinase 5.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0290 - - gmx:100777480 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0309 4 2789114 2795135 Gso6g0290 6 2706716 2712602 GST