Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g0290 | ATGATCACTAAAAAAAAACAAGAACAACTTCTTTTGTTCATCATCATCTTTGTTTTGGGGAAAATAACATTTTTCATTCCAACAACGAATGCCCAAGTGAACCACCACGAGTGCCGCCAAACATGCGGTTCCTCCAAACCCGTCCCTTACCCATTCGGATTCTCCTCCGGCTGCGCAATACGCCTGAAATGCACCGCCGGCGTGGCCTCCGTCGGAGAATTCCCGGTCAAAGTCAACACAGACAGCATGATCGTGAGCATTGAAGCTCAATGCAATCGCCCATTCGATAGCCTCCACCATCTGTTCAGCCACAAATACGCACCCACTTCGCGAAACGTGATCCTCTTAGAGAACTGCACCGGAACGCCTTTACCTTGCTTCATACCGGAGACTCTGGTCCGGACCCACTTCGAATCCGTGGGTTGCAACAACGCCTCCGGCACCGGCGAATTGAGCTGCTACTTCGAGAACAGAACCAACGGATTCGTAGATCGTAGAACGTTGGATGAAATTGGATGCAAGTACTTTATGTCGTCCCTTGCAGCGCCAGATATCAAAAACATTTCCGGTGCGCCTTTGTCTTTGGATGTAAATATAATCCAACTTGGATGGTGGCTTCAGGGAGATCAGTGTTTATGTTCTGATCATGCCAATTGTACCACGCTTCAGTCTCCGATGGATGGAAAGCCCGGGTTCCGGTGTCGCTGCCGCGACGGGTTCGTCGGCGATGGGTTTTTGGCCGGAACTGGTTGCCGGAAAGCCTCGTCATGCAACCCAGCGAAGTACATATCTGGTCGATGTGGAGGAACAACGAGATTCATTGTCTTAATTGGAGGGTTCGTTGTGGGTGTTTCGCTGATGGTTACTTTGGGTTCATTGTGTTGTTTCTATCGCCGACGCTCCAAATTGAGAGTCACAAATAGCACGAAAAGGCGCTTAACCGAAGCCACCGGCAAAAATAGCGTTCCTATCTATCCCTACAAAGACATTGAGAAAGCCACAAATAGTTTCTCCGAGAAGCAACGGCTTGGAACGGGAGCATACGGGACTGTTTATGCTGGGAAACTCTACAACAATGAATGGGTTGCCATTAAAAGGATAAAACACAGAGACACTGATAGTATTGAGCAAGTAATGAATGAGATCAAGCTCCTTTCTTCAGTGAGCCACACCAATTTAGTTCGTTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATCCTAGTGTATGAGTTCATGCCCAATGGAACACTGAGTCAGCACTTGCAGAAGGAGAGGGGGAGTGGTCTTCCTTGGCCAATTCGACTCACGATTGCCACTGAAACTGCACAAGCCATAGCATATCTTCATTCAGCCATTTGTCCCCCCATTTACCACAGGGACATCAAGTCCAGTAACATACTTTTGGACTACAATTTCAGGTCCAAAGTGGCAGATTTCGGTCTTTCTAGACTAGGGATGACCGAAATATCCCACATTTCGACAACCCCACAAGGAACCCCCGGCTACGTTGATCCACAGTACCATCAAGACTTTCACCTCTCTGACAAGAGTGATGTATATAGCTTGGGTGTTGTTCTTGTTGAGATCATAACAGGATTGAAAGTGGTGGACTTTTCACGTCCGCATAATGAAGTGAATCTAGCTTCTCTTGCTGCGGACAAGATCGGGAAAGGGCTTTTAAATGAAATTATAGACCCATTCCTTGAACCTGAAGTAAGAAGTGATGCTTGGACCCTTTCATCCATACACAAGGTGGCTGAGCTCGCATTCAGATGCATTGCGTTCCATAGGGACATGAGGCCTTCAATGACAGAAGTGGCTTCAGAGTTAGAGCAGCTTAGGTTGAGTAGGTGGACTACATTGGGAGACAACAATTGTGCAACCTCGACGGAATTGTCCTCCTGTTCTTCCTCGTCAAATGAATGTGAGAAACCACTAAGCATTGCAACGAGGAATTTTGGGGCAAAGGGTAAAGGCCACCTCAAGCTCCAAACTGGGCCTATTAATTTAAAGTCATTACAAAGGCCCAATAGTAACTCACCAGTCTCGGTGCAAGACCAAGACTTGTGGTTGAGTGAGCAGAGCTCTCCTTCGTCAAGTAGTTTTCCAAGCAAGTCATTTGATTGA | 2130 | 0.4714 | MITKKKQEQLLLFIIIFVLGKITFFIPTTNAQVNHHECRQTCGSSKPVPYPFGFSSGCAIRLKCTAGVASVGEFPVKVNTDSMIVSIEAQCNRPFDSLHHLFSHKYAPTSRNVILLENCTGTPLPCFIPETLVRTHFESVGCNNASGTGELSCYFENRTNGFVDRRTLDEIGCKYFMSSLAAPDIKNISGAPLSLDVNIIQLGWWLQGDQCLCSDHANCTTLQSPMDGKPGFRCRCRDGFVGDGFLAGTGCRKASSCNPAKYISGRCGGTTRFIVLIGGFVVGVSLMVTLGSLCCFYRRRSKLRVTNSTKRRLTEATGKNSVPIYPYKDIEKATNSFSEKQRLGTGAYGTVYAGKLYNNEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQKERGSGLPWPIRLTIATETAQAIAYLHSAICPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTEISHISTTPQGTPGYVDPQYHQDFHLSDKSDVYSLGVVLVEIITGLKVVDFSRPHNEVNLASLAADKIGKGLLNEIIDPFLEPEVRSDAWTLSSIHKVAELAFRCIAFHRDMRPSMTEVASELEQLRLSRWTTLGDNNCATSTELSSCSSSSNECEKPLSIATRNFGAKGKGHLKLQTGPINLKSLQRPNSNSPVSVQDQDLWLSEQSSPSSSSFPSKSFD* | 710 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g0290 | 709 | MobiDBLite | consensus disorder prediction | 671 | 709 | - | - | |
Gso6g0290 | 709 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 29 | 655 | IPR045274 | GO:0007166 | |
Gso6g0290 | 709 | Gene3D | Laminin | 212 | 246 | - | - | |
Gso6g0290 | 709 | Pfam | Protein kinase domain | 337 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso6g0290 | 709 | ProSiteProfiles | Protein kinase domain profile. | 337 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso6g0290 | 709 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 457 | 469 | IPR008271 | GO:0004672|GO:0006468 | |
Gso6g0290 | 709 | SUPERFAMILY | Protein kinase-like (PK-like) | 315 | 612 | IPR011009 | - | |
Gso6g0290 | 709 | CDD | STKc_IRAK | 343 | 614 | - | - | |
Gso6g0290 | 709 | ProSitePatterns | Protein kinases ATP-binding region signature. | 343 | 365 | IPR017441 | GO:0005524 | |
Gso6g0290 | 709 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 | 29 | 655 | - | - | |
Gso6g0290 | 709 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 412 | - | - | |
Gso6g0290 | 709 | SMART | serkin_6 | 337 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso6g0290 | 709 | Gene3D | Transferase(Phosphotransferase) domain 1 | 413 | 630 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g0290 | Gso-Chr6 | 2706716 | 2712602 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g0290 | 11 | 703 | Receptor kinase-like Gene Family | AT2G23450 | 51.416 | 0.0 | 657 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Gso6g0290 | Pkinase | 5.1e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g0290 | - | - | gmx:100777480 | 1397.1 |