Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0270 ATGGCCAAACGTTTCAAATTGAAGTTCAATATCCCTTCGTTTCAAATGTGTCGCTCAAAAGACCTTTCCTCTTTCCCTGGAAACCCCGTTCCTGCCATATACCGTCTTTCACCCGTTAACCACAACGCACGTGACACAAAGCATCCAAGCCTTCTTCCTTCTCCTTCTCCGTCACCGTCAAAGATAACGTCCATCGCGCAGAGATGCAAAATGTGCTGCGACAAGGACAGTTTGAAGAAACTGAAATCCAGCGTTCCGTCGAGGCGAAGCGATTTTCTGATCGACAACGTCGAGGAAGACGAAAGCGAGACTCTGATTTCTTGCATGACAAGTTTCTCCGACGAGTTTTGTCTCGGCGAGGAGAAGGATTTGAGTAGTAGTAGCAGCCTGAGAAGGAAGAAGATGGGCAGCGTAAAGAAGGTTCGGAGGGTGAGGTTTCAGAGTTCGGAGAAACGGAGAGGAACGGAGGTGAAGAAGACGACGGTGACGAGGAGAAGTGTGGAGGGGAAGGTGAAGGAGAGCTTCGCGGTGGTGAAGAAGTCGAAGGATCCTTATGAAGACTTCAGGAAATCGATGATGGAGATGATAACGGAGATGGAGATGTCTGAGGCCGAAGATTTGGAGCAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCGCGGAGTTATCATGCAGTTATTGTGCGGGCTTTCATGGAGATTTGGCAACAAATGTTCGTAATGAAAAATCTCCAAACGAACGTTAAAACTCAGGAAAAGTAA 759 0.4756 MAKRFKLKFNIPSFQMCRSKDLSSFPGNPVPAIYRLSPVNHNARDTKHPSLLPSPSPSPSKITSIAQRCKMCCDKDSLKKLKSSVPSRRSDFLIDNVEEDESETLISCMTSFSDEFCLGEEKDLSSSSSLRRKKMGSVKKVRRVRFQSSEKRRGTEVKKTTVTRRSVEGKVKESFAVVKKSKDPYEDFRKSMMEMITEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRAFMEIWQQMFVMKNLQTNVKTQEK* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0270 252 Pfam Transcriptional repressor, ovate 181 238 IPR006458 -
Gso6g0270 252 ProSiteProfiles OVATE domain profile. 177 236 IPR006458 -
Gso6g0270 252 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 74 241 IPR038933 GO:0045892
Gso6g0270 252 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 68 IPR038933 GO:0045892
Gso6g0270 252 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 175 237 IPR006458 -
Gso6g0270 252 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 68 - -
Gso6g0270 252 PANTHER TRANSCRIPTION REPRESSOR OFP7 74 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0270 Gso-Chr6 2540097 2540855 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso6g0270 Ovate 8.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0270 - - gmx:102666713 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0291 4 2610397 2611176 Gso6g0270 6 2540097 2540855 GST