Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0258 ATGCCATACAAGTACGAGAATTATGACCCCTCATTCCCCGACCAACCCGTGGTTGACTTATACCTCCCAGTTTGGGCCAGGTTACCTGCCTTCAAGTCCAAGCCAGCTTTCATTTGGGCACAAGACTTGCACACCTTCACTGCTCTCACCTACCAACAACTTAACGCCACAGTTGATGTCATCTCCTCTCGACTACTCGCTCCGTTACAACGAGGTGACACTGTTCTTCTTCTTTGCTCTCCTGGACTTGACCTAGTTGAGCTCATCTTTGCGTGTCAAAGAGCTGGTCTTTTGAGCGTTCCCATCATCCCTCCTCACCCTTCTTTTGCTAAAGAAAACTATCACCATCTCATAAGAGCCATTTCGCAGACCAAACCCAAAGCTGCCCTAGCTCACCCTCACTACATATCAAGCATTAGACAATACGTGTCTTCCCCCCACAACAACAAGAAACTTGCTCACATGTTACATAGCATCCACTGGATTTCCGTAGACGAACTCAAACATCATCATGGTGTTGTTACTTTAAATAATCTTGATTCACTGACATACAGTGGTTGCAAAGCGAATGAAGTTTACTTGGTTCAGTACACGTCTGGTGCCACTGGGGTTCCAAAACCCGTGCTTGTCACAGCGGGCTCAGCTGCTCACAACGTTAGAACAGCGAGAAAAGCTTACGATCTTCATCCCAACAGCACAATCGTTTCGTGGCTGCCTCAGTATCATGATTGTGGTCTCATGTTCTTGTTGCTGACCCTTGTATCAGGAGCCACGTGTGTTCTCACTTCCCCAACGGCGTTCATCAAACGCCCCAGACTCTGGCTTGAACTCTTGTCGAAATTCAAGGCCACGTGCACTCCCGTTCCCTCGTTCACATTGCCACTCGTGGTCAAACGAGGAGGAATTCACCAAGGAGCTTCTACTTCATCCATCAACCTTTCAACTTTGAAGAATCTCATAATCATCAACGAGCCCGTCTATAGAGACTCAGTGGAAGAATTTGTTCACACTTTTTCTCCATTTGGGTTAAGCCCTTCTTCTATCTCTCCTTCCTACGGGTTAGCAGAGAATTGCACCTTTGTGTCCACTGCGTGGAGGAGCGTTAATAGTGATCATAATGATAGTGTTGGTGCCTATTATTCTTCAAGCTTCCCAGATTTTCCCACTCACAACAAGCTCTTACCAGTTGCAAGGCTCGAAAACGTGGAAGAGGAAGACGTGGAGATTATGGTTGTTGATGAAGAAACGTTGGAGCCAGCTGAGGATGGTGTTGAAGGAGAAATTTGGGTTGCTTCACCAAGCAACGCTTCTGGGTACCTTGGCCACCCTAGTTTAACAAGAGAAGTGTTTCATGGAAGACTAAGAAACATGATTAGCAAGTGCTTTCTTCGAACTGGGGACAGAGGCATAGTGAAAGGAGAAAAAAGATATCTTTTTGTCACTGGTCGCTGTCAAGACGTTATGGAACTCCGAAATGGTCGAAAGGTTCATCCACATTACATAGAAACTGCGGCTTATAACAGTTGCCCCAAGTTACTGAGAGGAGGTTGTCTTGCAGCGTTTAAAGTTTCATCAACGGTGGTGGTTGTGGCAGAGATGCAGAGGATCGAAAAGGGTATAGAAAAAGGTGTGTTGAAGAGGATTTGCGAGGGAGTTAAAGAAGCTGTTTGGAAGAAAGAGAAGGTGGAGGTTGGATGGGTGGTTTTGGTTGAGAGTGAGTGTGTTCCGAAAACCACTTCTGGGAAATTGATAAGAGGGAAGGCTAAGGAGAAGCTTCTTGCAGGGGAAATGGTGATTCTGATGAAGATGCGGTTTGGAAAAGATGTTACTGTTTTTAAGAGAGCAAAGAAGGTAACTGGTTCAATTTTATTTGCAGAAGCTCGTAGCTCATTATAA 1896 0.4568 MPYKYENYDPSFPDQPVVDLYLPVWARLPAFKSKPAFIWAQDLHTFTALTYQQLNATVDVISSRLLAPLQRGDTVLLLCSPGLDLVELIFACQRAGLLSVPIIPPHPSFAKENYHHLIRAISQTKPKAALAHPHYISSIRQYVSSPHNNKKLAHMLHSIHWISVDELKHHHGVVTLNNLDSLTYSGCKANEVYLVQYTSGATGVPKPVLVTAGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTLVSGATCVLTSPTAFIKRPRLWLELLSKFKATCTPVPSFTLPLVVKRGGIHQGASTSSINLSTLKNLIIINEPVYRDSVEEFVHTFSPFGLSPSSISPSYGLAENCTFVSTAWRSVNSDHNDSVGAYYSSSFPDFPTHNKLLPVARLENVEEEDVEIMVVDEETLEPAEDGVEGEIWVASPSNASGYLGHPSLTREVFHGRLRNMISKCFLRTGDRGIVKGEKRYLFVTGRCQDVMELRNGRKVHPHYIETAAYNSCPKLLRGGCLAAFKVSSTVVVVAEMQRIEKGIEKGVLKRICEGVKEAVWKKEKVEVGWVVLVESECVPKTTSGKLIRGKAKEKLLAGEMVILMKMRFGKDVTVFKRAKKVTGSILFAEARSSL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0258 631 Pfam AMP-binding enzyme 31 491 IPR000873 -
Gso6g0258 631 PANTHER 10A19I.5 6 611 - -
Gso6g0258 631 Gene3D - 488 604 IPR045851 -
Gso6g0258 631 Gene3D - 10 484 IPR042099 -
Gso6g0258 631 CDD FAAL 48 594 IPR040097 GO:0008610
Gso6g0258 631 SUPERFAMILY Acetyl-CoA synthetase-like 24 594 - -
Gso6g0258 631 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 6 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0258 Gso-Chr6 2439322 2441217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0258 187 592 Monolignol Biosynthesis Gene Families AT4G19010 25.180 7.26e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0258 - - gmx:102666455 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0278 4 2508759 2510699 Gso6g0258 6 2439322 2441217 GST