Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0256 ATGGGTTGGACACGAGAAGAGAATAGACGTTTTGAGGATGCTCTTGCGGTTCATGGGCCTGATGACCCAAATCGGTGGCAACATGTGGCCAACGCCGTGGGTGGAAAGTCCGTACAAGAGGTGAAAATGCACTATGAGATCCTCCAGGAAGATGTCATTCGAATAGAGCGTGATCAAATCCCACTTCCCAGCTACAGAGGTAACGAAAGGCAGATTCACAATGAGCAAAGGCGAATGAGGGATCTAAGTCTCCGATGA 258 0.4922 MGWTREENRRFEDALAVHGPDDPNRWQHVANAVGGKSVQEVKMHYEILQEDVIRIERDQIPLPSYRGNERQIHNEQRRMRDLSLR* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0256 85 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Gso6g0256 85 MobiDBLite consensus disorder prediction 70 85 - -
Gso6g0256 85 Gene3D - 2 50 - -
Gso6g0256 85 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Gso6g0256 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Gso6g0256 85 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Gso6g0256 85 CDD SANT 3 45 IPR001005 -
Gso6g0256 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Gso6g0256 85 SMART sant 3 51 IPR001005 -
Gso6g0256 85 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Gso6g0256 85 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Gso6g0256 85 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0256 Gso-Chr6 2433700 2435207 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso6g0256 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0256 - - gmx:100786029 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0276 4 2501772 2503710 Gso6g0256 6 2433700 2435207 GST