Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0222 ATGGTGAATGAAGGTCGTTTTCTTCCCACGATGGATCTGCTACGGTCGGAGCCTATGCAACTGGTTCAATTGATCATTCCAATCGAATCGGCTCATCGATCCATCTCTTACCTTGGCGATCTCGGCCTCATTCAATTCAAAGATCTCAATGCAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAAAGATGTGGGGAAATGGCACGTAGGCTACGGTTGTTTAAGGAACAAATGACGAAAGCAGGTGTATCGCCCTCAACGTGGTCAACAAGAGACAATCATTTTGATCTGGAACATTTGGAGGTTAAACTTGAAGAACTTGAAGCTGAACTCCTCGAGATTAATGCAAATAATGAAAAGTTACAACACACTTACAATGAGCTATTAGAGTATAAGCTTGTTCTGGAGAAGGTTGGAGAGTTTTTCTCTTCAGCAAAAAATAAGGCTGTAGCTCAGCAGAAAGAGCTTGAATTTCAGACAACTGTTGAAGGGTCTATTGACAGTCCATTATTATTGGAACAAGAGGAGACGACAACAAAGCAAATTAAGCTGAGGTTTATTAGTGGACTTGTTCATAGGGAAAAATCAATTCCTTTCGAAAGAATTATATTTCGTGCTACTAGGGGAAATGTGTTTCTCAAACAGGCTGTGATTCAACATCCTGTTCTTGATCCTTTGTCAGGCGAGAAGGTTCATAAAAATGTATTTGTTGTCTTTTATTCTGGAGAAAGAGTTAAAAGCAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGCAAACAATTTCAGACGATAAGGGAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACCATTGATGCAGGGTTGATTCACCGGAGCACCCTATTGCAGACAATTGGATATCACTATGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAATCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAGCCAGATTCACAAAGTATTGGAGCGGGCAACTATGGACTGCAGTTCTCAAGTTGGGGCGATATTTCAAGTTTTAGAGACAAAGGAATCACCACCTACCTATTTTAGCACAAACAAATTCACTTCTTCTTTTCAAGAAATTGTAGATGCCTATGGAATCGCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAATTGTCACATTTCCATTCCTTTTTGCTGTGATGTTTGGTGACTGGGGGCATGGCATATGCTTATTACTGGCGGCTTTGTATTTAATAATCAGAGAGAAAAAATTTGCAAGTCAGAAACTTGGAGACATAATGGAAATGGCATTTGGCGGACGCTATATCATTATGCTGATGGCCCTCTTCTCAATCTATACCGGGTTGATATATAACGAGTTTTTCTCTGTTCCATTTGAACTATTTGGACCATCTGCTTATGGATGTCGTGATTCTTCATGCAGGGATGCTTCTACAACAGGTTTTATAAAAGTGCGTAGCACTTATCCATTTGGTGTGGATCCTAAATGGCATGGAACTCGGAGTGAACTTCCATTTCTTAATTCTTTGAAGATGAAGATGTCAATTCTGCTGGGGGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTTTAATGCAAAATACTTCGAAAACAACATAAATATCTGGTACCAGTTCGTTCCCCAGATAATATTCTTAAACAGCTTGTTTGGCTACCTTTCACTCCTCATAATTATAAAATGGAGCACTGGGTCACAGGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTTTTTGTTGGTCAAAAGCTCCTTCAACTCGTGTTACTACTGTTGGCACTTGTTGCTGTACCATGGATGCTAGTACCAAAGCCCTTTCTCCTGAAGAAGCAACATCAAGAAAGGCATCAAGGCCAATCTTACGATTTGCTCTACGGCACCGATGACCCTCTTGAATCAGAATCACAAAGTATTCCCCATGACGAATTTGACTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTTTCTAACACGGCTTCGTATCTACGTTTATGGGCCCTCAGCTTAGCTCATTCAGAGTTGTCGAGTGTTTTCTATGACAAAGTTCTCCTTCTGGCCTGGGGGTATAATAGCACTATTGTTCTCATTGTTGGCATTTTTGTTTTTATCTGTGCAACTGTTGGTGTGTTACTGTTAATGGAAAGTCTAAGTGCTTTCTTACATGCTTTGAGACTTCACTGGGTAGAGTACCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTCTTCCCGTTTTCGTTTACATTACTCACGGATGAGGATGAACTGTAA 2448 0.4003 MVNEGRFLPTMDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLIQFKDLNADKSPFQRTYASQIKRCGEMARRLRLFKEQMTKAGVSPSTWSTRDNHFDLEHLEVKLEELEAELLEINANNEKLQHTYNELLEYKLVLEKVGEFFSSAKNKAVAQQKELEFQTTVEGSIDSPLLLEQEETTTKQIKLRFISGLVHREKSIPFERIIFRATRGNVFLKQAVIQHPVLDPLSGEKVHKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLSKQFQTIREVSGRLSELKTTIDAGLIHRSTLLQTIGYHYEQWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLERATMDCSSQVGAIFQVLETKESPPTYFSTNKFTSSFQEIVDAYGIAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLAALYLIIREKKFASQKLGDIMEMAFGGRYIIMLMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDSSCRDASTTGFIKVRSTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYFNAKYFENNINIWYQFVPQIIFLNSLFGYLSLLIIIKWSTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKLLQLVLLLLALVAVPWMLVPKPFLLKKQHQERHQGQSYDLLYGTDDPLESESQSIPHDEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYNSTIVLIVGIFVFICATVGVLLLMESLSAFLHALRLHWVEYQNKFYEGDGYKFFPFSFTLLTDEDEL* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0222 815 Pfam V-type ATPase 116kDa subunit family 37 806 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso6g0222 815 Coils Coil 100 127 - -
Gso6g0222 815 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 815 - -
Gso6g0222 815 PANTHER VACUOLAR PROTON ATPASES 11 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso6g0222 815 PIRSF ATP6V0A1 9 815 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0222 Gso-Chr6 2147755 2156158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0222 11 814 Primary Pumps ATPases(2) AT4G39080 74.505 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0222 K02154 - gmx:100805813 1541.94