Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0211 ATGCCCACACTAAGTTATTCCCAAACCACACCAATGTCGACCTCTTCACCACTCTTCCTCCTCCTAATTATTATTATTATTATTCCTATCCTCCACTTTCACGCGGCGGAAGCCGCCGCCAAGGGACAGTGGCAGCTCCTCCACAAAAACATCGGCATTGTCGCCATGCACATGCAGCTCCTCCACAACGACCGCGTCATCATCTTCGACCGCACCGACTTTGGACTCTCCAACCTAACCCTCCCCGACGGAAGGTGCCGCAACAACCCAAACGAAATGGTCGTCAAAACCGACTGCACCGCACACTCTGTCGAATACGACGTGGTAGCCAACACATTCCGCGCCCTCTTCGTCCAAACTAACGTCTGGTGCTCCTCCGCTTCAGCCTCTCCCGACGGAACACTAGTTCAGACCGGCGGATTCAACGACGGCGACCGCGCCGTCAGAACCTTCACCCCGTGCCGCACCTGCGACTGGAAAGAAATTGACGATGGACTCGCGGCACGGAGATGGTACGCCACCAATCACATCTTGCCAGATGGGCGACAAATAATTATCGGCGGAAGAAGACAATTCAACTACGAGTTTTACCCCAAGACACAAGCTAAGAACACTTACAGCTTACCTTTTCTGGTTCAAACCAACGACGCTAACGCTGAAAACAACCTCTACCCGTTTGTTTTTCTAAACGTGGATGGCAACCTTTTTATCTTCTCAAACAACCGCGCTATCTTATTCGATTACAATAAGAACAGTGTGGTGAGAACGTACCCTCAAATACCAGGTGGAGATCCACGGTGTTATCCTAGCACCGGTTCCGCGGTTTTGCTTCCTTTGAAGAATCTTCGAGCACCTAAAGTGGAGGCTGAGGTTTTAATCTGTGGTGGAGCCCCGAGAGGAGCTTACCAGAATGCTTTATCGGGTAAGTTTGTTCCAGCGTTGGAAACGTGCGCTCGGATTAAAATAACCGACCCGAACCCGAAATGGGATATGGAAACAATGCCCGGTGCTAGAGTCATGAGTGACATGGTTTTACTCCCGAACGGCGACGTTTTGATTGTTAATGGAGCAGCCGTAGGGACTGCGGGCTGGGAATTGGGCCGTAACCCGCTACTGAGTCCGTTTCTTTATAAACCAAATAATCGGGTCGGGTCGAGATTTGAGGTTCAAACATCGTCTGATATTCCGAGAATGTACCACTCCAGTGCCGTTTTGCTTCGTGACGGTCGCGTTCTGGTTGCTGGGAGCAACCCTCACATTTATTACAAATTTACGAATGTTTTGTTCCCAACGGAGTTACGGTTGGAAGCGTTTTCTCCTTGGTATCTTGAGCCTGGATTCTCTAGCGTGCGTCCCACAATAGTGTTTCCTGCGTCCCAAACAAAACTCAAGTACGGTCAGACGTTGAGGCTTCGGTTTGAGGTGATGAGCGCGACTTTGGTTGGGGATTCGGTGTCGGTTACGATGCTGTCGCCGCCATTTAACACGCACTCGTTCTCCATGAATCAGAGGATGCTGGTGCTGGAGCCACACGATTTGAGTAAGGTTGGGGAATCGACGTACGAGGTTGAAGTTACCGCGCCGGTTTCCGCTGTTCTTGCGCCACCGGGTTTCTATCTGCTGTTTCTGGTTCATCAAGAAATTCCAAGCCAGGGTATTTGGGTCCAGATGGTGTGA 1677 0.5081 MPTLSYSQTTPMSTSSPLFLLLIIIIIIPILHFHAAEAAAKGQWQLLHKNIGIVAMHMQLLHNDRVIIFDRTDFGLSNLTLPDGRCRNNPNEMVVKTDCTAHSVEYDVVANTFRALFVQTNVWCSSASASPDGTLVQTGGFNDGDRAVRTFTPCRTCDWKEIDDGLAARRWYATNHILPDGRQIIIGGRRQFNYEFYPKTQAKNTYSLPFLVQTNDANAENNLYPFVFLNVDGNLFIFSNNRAILFDYNKNSVVRTYPQIPGGDPRCYPSTGSAVLLPLKNLRAPKVEAEVLICGGAPRGAYQNALSGKFVPALETCARIKITDPNPKWDMETMPGARVMSDMVLLPNGDVLIVNGAAVGTAGWELGRNPLLSPFLYKPNNRVGSRFEVQTSSDIPRMYHSSAVLLRDGRVLVAGSNPHIYYKFTNVLFPTELRLEAFSPWYLEPGFSSVRPTIVFPASQTKLKYGQTLRLRFEVMSATLVGDSVSVTMLSPPFNTHSFSMNQRMLVLEPHDLSKVGESTYEVEVTAPVSAVLAPPGFYLLFLVHQEIPSQGIWVQMV* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0211 558 Gene3D - 38 446 IPR037293 -
Gso6g0211 558 SUPERFAMILY E set domains 447 557 IPR014756 -
Gso6g0211 558 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 33 557 - -
Gso6g0211 558 CDD E_set_GO_C 446 557 IPR015202 -
Gso6g0211 558 Pfam Galactose oxidase-like, Early set domain 451 556 IPR015202 -
Gso6g0211 558 Gene3D Immunoglobulins 450 558 IPR013783 -
Gso6g0211 558 Pfam Glyoxal oxidase N-terminus 56 296 IPR009880 -
Gso6g0211 558 SUPERFAMILY Galactose oxidase, central domain 103 444 IPR011043 -
Gso6g0211 558 PANTHER SECRETED PROTEIN-RELATED 33 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0211 Gso-Chr6 2026180 2028379 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0211 - - gmx:100816842 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0233 4 2129389 2131313 Gso6g0211 6 2026180 2028379 GST
Gso14g1830 14 50703550 50705408 Gso6g0211 6 2026180 2028379 PCT