Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0209 ATGGATGATGCTGGGCATCGTGAGAATGGAAGACACAAAGCAGCAGATCAATATAAATCTGCTCAGGGTCAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAGATTATGGCAATGATTGCTGAAAGAGATGCAGCCATTCAAGAAAGAAATCTGGCCATTTCCGAGAAAAAAGCAGCATATGCTGAGCGTGACATGGCATACATGCAGCGAGATGCTGCAATTGCAGAACGTAATAATGCAATGTTGGAACGAGATAATGCAATTGCAACTCTTCAGTATCGTGAAACCTCCTTAAGTAGTGGCAGTATGCCATCATGCCCTCCAGGATGCCAAATTTCACGTGGTGTCAAGCATGTACATCATCCCCAACAACAGGTGCACCATATACCTAACATGGGTGATGCCTCTTACAACACAAGGGAAATGCACACAACGGAGGTCCTCCCTGCAGCCCCCATCCCTTCTGAGACTGGGAAGTCAAGGCGGGCCAAGCGACCAAAGGAACCAAAGTCAGCTCCACCTAATAAAAAGACTTCAAAACCCTCAAAAAAAGTCAAGAAGGAGAGTGAAGACTTGAATAATATGTTTGGCAAGGCACATGAGTGGAAGAGTGGTCAGGAAATGGTCAATGGAGGTGATGATCTTAACAAGCAGTTAGCAGTGTCGAAGGCTGATTGGAAAGGTCAGGACTTGGGGTTGAACCAAGTGGCGTATGATGAGTCAACCATGCCAGCGCCAGTATGCTCTTGTACCGGTGTCCTGAGGCAGTGTTACAAATGGGGTAATGGGGGTTGGCAGTCTGCCTGTTGCACAACTACTCTGTCAATGTATCCACTTCCTGCAGTGCCCAACAAGAGACATGCTCGGGTAGGCGGCCGGAAGATGAGTGGGAGTGCTTTCAACAAGCTGCTTAGTCGACTTGCAGCAGAAAGTCATGATCTGTCAAACCCTGTTGACCTCAAGGACCATTGGGCAAAACATGGAACGAACCGATACATCACAATAAAGTAG 1014 0.4744 MDDAGHRENGRHKAADQYKSAQGQWLMQHQPSMKQIMAMIAERDAAIQERNLAISEKKAAYAERDMAYMQRDAAIAERNNAMLERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHVHHPQQQVHHIPNMGDASYNTREMHTTEVLPAAPIPSETGKSRRAKRPKEPKSAPPNKKTSKPSKKVKKESEDLNNMFGKAHEWKSGQEMVNGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAESHDLSNPVDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0209 337 MobiDBLite consensus disorder prediction 1 15 - -
Gso6g0209 337 PANTHER - 1 337 IPR010409 -
Gso6g0209 337 MobiDBLite consensus disorder prediction 1 22 - -
Gso6g0209 337 MobiDBLite consensus disorder prediction 146 191 - -
Gso6g0209 337 MobiDBLite consensus disorder prediction 159 175 - -
Gso6g0209 337 SMART GAGA_bind_2 1 337 IPR010409 -
Gso6g0209 337 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 337 - -
Gso6g0209 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0209 Gso-Chr6 2008255 2012388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0209 66 337 BBR or BPC Transcription factor family AT5G42520 63.103 1.29e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gso6g0209 GAGA_bind 2.6e-109 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0232 4 2116298 2120438 Gso6g0209 6 2008255 2012388 GST