Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0207 ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACTTGCGGTGGCGATGCGGCGGAGAAGGATGATTACCACCAAGTCTCTGAGATCAAGGAATCTAACGATAAACGTGGTTGGAGTTTCCGAAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAACTTCAGAATGTAGTACTTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCTTCCTTTGAAAGCTCACAAGTAGAAGAAACAAATGTCATTGAAACTGAGGAGAAGTTGGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCAGAGAGAACTACTACAGCTTAAGAAAGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGACATGCTGTAGGAACCCTGCGTTGTATTCAAGCCATCATCAAAATGCAGATCCTTGTGCGAGCTCGTCGTGCTTGGCAGTCACGTCTGGAAAATCATTTAAATCATAAGGATGGCAAAAGGGATTCCTCAGAAGCTTTGGGAAACAAAAATCTCATGACCAAATCAAATGTGAGTTACATTTCCATTGAGAAGCTGCTTAGCAATAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACATATCCATGTAAAGTGTGATCCTTCTAAATCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAACTAGTTCTTTGGCAGAGCAATCAAGGGAAAGCAAAGATAGTTCTCCCCTGTTTCAATTCGAAACAGGTATTCCTTCTGAACCTTTTCCCCAAGCAGCTGACTCAGAGCTCACTGTTGAAGATTCACTTCTGCCATCTGAGGATGAAGAAAAGTTAATTACTTATGATGCTAATGACTTTGAGTTTCAAGCAAGCTACTCCACATCATCTATTGTAAAAGATGACTTGGTACAGGTTCCTCCTGAAGAAAGAATTGCATATGATGCTAAAGTTGCCTCAGACGAAGCTGATTCCTTCCTAAATGAAAAATCAGCATCAGATGCAAGTGCCCCACCAGAGCTTAATTTCATTCATAAGGGGCCTGAAATTGCCCCACCATCAGAGCATCATTCTCTTCAGAAGGGGACTGAAATTGCCCCACCATCAGAGCATAGCTCTCTTCATAAGGGTCCTGAAACTGCCCCACCATCAGAGCCTAATTATTTTAATCAGAAGCCTGAAATTGATGGTGAGCAGGGCATACGATCCATGAAAAGATTTGCCTCAGACCAATTAGAGGCTGAAGGAAAGAAACCTGTAAATGGTTCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTTAGTTCAATAGCAAATTCTGTTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCTGTTGAATCACAAGGAGACACCTCTTCTGTAGGCAATGATACTGCATATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTGCTTATCTTTCTAGGTTTGCTGGTTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCTGGAGCTACGGAAAATGAGCGAGATGCCAAAGATTTAGTGGAAGGGATTGGTATTCTTGAGAACACTGTAAACCGTGATGATGAGGCCAATGGCAATGTTTCACATGTCATCCCAGCTTCTAACCTAGCTAATTCTGTTTTGGATAAGTCAGAGATTGTTGATGACATTAGTGCCAATTTGGGTCACTCGGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACCGAGAAAAATGCACCTGACCTGCAGAGAGAGCTGCCAGAGTCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACACCTTCAAGTGAAGTGTCTGTAAAACCTAAAGATAGTACAATCAGCAAGACTAGATCTGGCAATAAACGTCGGAGCCTATCATTGAGTAACAAATCACCTACAAATCCAAATCATGATTCAGGCTCAAAAGGCAGTAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTTAGTAAAGCCTGATCACATTGATCAAGAACCTAGAGATAATAGTACTAACAACAATTCTCTTCCCCATTTCATGCTAGCTACCGAATCTGCTAGGGCCAAGGTTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAACGAGACATTGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAAGTTTCTCCCCGCATCCAACGATCAACATCTAAGGCACAGCAGAGTGCCAAAGGAAACAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2532 0.4246 MGKSTSCFKLITCGGDAAEKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKETSECSTFNFQPLPEPNVVEKIYTTNCSDEKPQLSSFESSQVEETNVIETEEKLDVNPPESDVIIIQAAIRGLLAQRELLQLKKVVKLQAAVRGHLVRRHAVGTLRCIQAIIKMQILVRARRAWQSRLENHLNHKDGKRDSSEALGNKNLMTKSNVSYISIEKLLSNRFASQLLESTPKNKHIHVKCDPSKSDSAWKWLERWMSVSSKDIAECKETSSLAEQSRESKDSSPLFQFETGIPSEPFPQAADSELTVEDSLLPSEDEEKLITYDANDFEFQASYSTSSIVKDDLVQVPPEERIAYDAKVASDEADSFLNEKSASDASAPPELNFIHKGPEIAPPSEHHSLQKGTEIAPPSEHSSLHKGPETAPPSEPNYFNQKPEIDGEQGIRSMKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSIANSVRTSSLSYQDSAVESQGDTSSVGNDTAYRSKEFAFENPAAYLSRFAGSECGTELSISSTLDSPDISEPGATENERDAKDLVEGIGILENTVNRDDEANGNVSHVIPASNLANSVLDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQRELPESVLQDLRSSPEASPRSHLTVPESQGTPSSEVSVKPKDSTISKTRSGNKRRSLSLSNKSPTNPNHDSGSKGSREQLPKDQQNGKRRNSFGLVKPDHIDQEPRDNSTNNNSLPHFMLATESARAKVNANNSPRSSPDVHERDIEVKKRHSLPGATGRQVSPRIQRSTSKAQQSAKGNNVHPPQERKWLR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0207 843 MobiDBLite consensus disorder prediction 635 843 - -
Gso6g0207 843 MobiDBLite consensus disorder prediction 501 524 - -
Gso6g0207 843 Gene3D - 123 172 - -
Gso6g0207 843 PANTHER PROTEIN IQ-DOMAIN 32 1 833 - -
Gso6g0207 843 PANTHER IQ-DOMAIN 5-RELATED 1 833 - -
Gso6g0207 843 SMART iq_5 122 144 IPR000048 GO:0005515
Gso6g0207 843 SMART iq_5 145 166 IPR000048 GO:0005515
Gso6g0207 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 190 IPR027417 -
Gso6g0207 843 MobiDBLite consensus disorder prediction 555 577 - -
Gso6g0207 843 MobiDBLite consensus disorder prediction 376 478 - -
Gso6g0207 843 MobiDBLite consensus disorder prediction 450 472 - -
Gso6g0207 843 MobiDBLite consensus disorder prediction 789 805 - -
Gso6g0207 843 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Gso6g0207 843 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Gso6g0207 843 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Gso6g0207 843 Pfam Protein of unknown function (DUF4005) 749 825 IPR025064 -
Gso6g0207 843 MobiDBLite consensus disorder prediction 662 725 - -
Gso6g0207 843 MobiDBLite consensus disorder prediction 811 833 - -
Gso6g0207 843 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0207 Gso-Chr6 1969900 1975771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0207 476 843 IQD Protein Family AT1G19870 39.211 4.56e-51 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0207 - - gmx:100799424 1655.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0229 4 2077216 2083020 Gso6g0207 6 1969900 1975771 GST