LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso6g0207	ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACTTGCGGTGGCGATGCGGCGGAGAAGGATGATTACCACCAAGTCTCTGAGATCAAGGAATCTAACGATAAACGTGGTTGGAGTTTCCGAAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAACTTCAGAATGTAGTACTTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCTTCCTTTGAAAGCTCACAAGTAGAAGAAACAAATGTCATTGAAACTGAGGAGAAGTTGGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCAGAGAGAACTACTACAGCTTAAGAAAGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGACATGCTGTAGGAACCCTGCGTTGTATTCAAGCCATCATCAAAATGCAGATCCTTGTGCGAGCTCGTCGTGCTTGGCAGTCACGTCTGGAAAATCATTTAAATCATAAGGATGGCAAAAGGGATTCCTCAGAAGCTTTGGGAAACAAAAATCTCATGACCAAATCAAATGTGAGTTACATTTCCATTGAGAAGCTGCTTAGCAATAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACATATCCATGTAAAGTGTGATCCTTCTAAATCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAACTAGTTCTTTGGCAGAGCAATCAAGGGAAAGCAAAGATAGTTCTCCCCTGTTTCAATTCGAAACAGGTATTCCTTCTGAACCTTTTCCCCAAGCAGCTGACTCAGAGCTCACTGTTGAAGATTCACTTCTGCCATCTGAGGATGAAGAAAAGTTAATTACTTATGATGCTAATGACTTTGAGTTTCAAGCAAGCTACTCCACATCATCTATTGTAAAAGATGACTTGGTACAGGTTCCTCCTGAAGAAAGAATTGCATATGATGCTAAAGTTGCCTCAGACGAAGCTGATTCCTTCCTAAATGAAAAATCAGCATCAGATGCAAGTGCCCCACCAGAGCTTAATTTCATTCATAAGGGGCCTGAAATTGCCCCACCATCAGAGCATCATTCTCTTCAGAAGGGGACTGAAATTGCCCCACCATCAGAGCATAGCTCTCTTCATAAGGGTCCTGAAACTGCCCCACCATCAGAGCCTAATTATTTTAATCAGAAGCCTGAAATTGATGGTGAGCAGGGCATACGATCCATGAAAAGATTTGCCTCAGACCAATTAGAGGCTGAAGGAAAGAAACCTGTAAATGGTTCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTTAGTTCAATAGCAAATTCTGTTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCTGTTGAATCACAAGGAGACACCTCTTCTGTAGGCAATGATACTGCATATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTGCTTATCTTTCTAGGTTTGCTGGTTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCTGGAGCTACGGAAAATGAGCGAGATGCCAAAGATTTAGTGGAAGGGATTGGTATTCTTGAGAACACTGTAAACCGTGATGATGAGGCCAATGGCAATGTTTCACATGTCATCCCAGCTTCTAACCTAGCTAATTCTGTTTTGGATAAGTCAGAGATTGTTGATGACATTAGTGCCAATTTGGGTCACTCGGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACCGAGAAAAATGCACCTGACCTGCAGAGAGAGCTGCCAGAGTCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACACCTTCAAGTGAAGTGTCTGTAAAACCTAAAGATAGTACAATCAGCAAGACTAGATCTGGCAATAAACGTCGGAGCCTATCATTGAGTAACAAATCACCTACAAATCCAAATCATGATTCAGGCTCAAAAGGCAGTAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTTAGTAAAGCCTGATCACATTGATCAAGAACCTAGAGATAATAGTACTAACAACAATTCTCTTCCCCATTTCATGCTAGCTACCGAATCTGCTAGGGCCAAGGTTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAACGAGACATTGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAAGTTTCTCCCCGCATCCAACGATCAACATCTAAGGCACAGCAGAGTGCCAAAGGAAACAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA	2532	0.4246	MGKSTSCFKLITCGGDAAEKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKETSECSTFNFQPLPEPNVVEKIYTTNCSDEKPQLSSFESSQVEETNVIETEEKLDVNPPESDVIIIQAAIRGLLAQRELLQLKKVVKLQAAVRGHLVRRHAVGTLRCIQAIIKMQILVRARRAWQSRLENHLNHKDGKRDSSEALGNKNLMTKSNVSYISIEKLLSNRFASQLLESTPKNKHIHVKCDPSKSDSAWKWLERWMSVSSKDIAECKETSSLAEQSRESKDSSPLFQFETGIPSEPFPQAADSELTVEDSLLPSEDEEKLITYDANDFEFQASYSTSSIVKDDLVQVPPEERIAYDAKVASDEADSFLNEKSASDASAPPELNFIHKGPEIAPPSEHHSLQKGTEIAPPSEHSSLHKGPETAPPSEPNYFNQKPEIDGEQGIRSMKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSIANSVRTSSLSYQDSAVESQGDTSSVGNDTAYRSKEFAFENPAAYLSRFAGSECGTELSISSTLDSPDISEPGATENERDAKDLVEGIGILENTVNRDDEANGNVSHVIPASNLANSVLDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQRELPESVLQDLRSSPEASPRSHLTVPESQGTPSSEVSVKPKDSTISKTRSGNKRRSLSLSNKSPTNPNHDSGSKGSREQLPKDQQNGKRRNSFGLVKPDHIDQEPRDNSTNNNSLPHFMLATESARAKVNANNSPRSSPDVHERDIEVKKRHSLPGATGRQVSPRIQRSTSKAQQSAKGNNVHPPQERKWLR*	844

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso6g0207	843	MobiDBLite	consensus disorder prediction	635	843	-	-
	Gso6g0207	843	MobiDBLite	consensus disorder prediction	501	524	-	-
	Gso6g0207	843	Gene3D	-	123	172	-	-
	Gso6g0207	843	PANTHER	PROTEIN IQ-DOMAIN 32	1	833	-	-
	Gso6g0207	843	PANTHER	IQ-DOMAIN 5-RELATED	1	833	-	-
	Gso6g0207	843	SMART	iq_5	122	144	IPR000048	GO:0005515
	Gso6g0207	843	SMART	iq_5	145	166	IPR000048	GO:0005515
	Gso6g0207	843	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	126	190	IPR027417	-
	Gso6g0207	843	MobiDBLite	consensus disorder prediction	555	577	-	-
	Gso6g0207	843	MobiDBLite	consensus disorder prediction	376	478	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso6g0207	Gso-Chr6	1969900	1975771	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso6g0207	476	843	IQD Protein Family	AT1G19870	39.211	4.56e-51	187

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso6g0207	-		-	gmx:100799424	1655.19

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso4g0229	4	2077216	2083020	Gso6g0207	6	1969900	1975771	GST

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