Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0206 ATGCGTCGATTGCAAAAATCGAAACGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCAGAGGAATCTCCTTCACAGGTTGGGTTAAATTCTCAAGACCACGTCCAAGCAAAGACATCATTGCTGTTGCATCCAGATGGAGCAGGTTCTGACGACATTCTGCCTCCTGGATTTGAGGGAACTCATGCTAAAAGTCAGTCCGAGATTAAGCTATCCCAAATACCAGTTATTAAATGGATTACTCCTCCAAAGATTGAGGTAAATCCCACATGGCGAGTAGCGGTTGGGGAAGAAAGCACAGAGGTAGAGGATCAACCTCAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGAATATCTTCCATTCCTCAAAACCCTTCTGTTTCAATGGATGTTGAAGAGTCCCATTGCATGGATGATCAAACTGCTTTGATACCAATAACACCAATTGAAGAAGAAGAAGCAGCAGCAAAAGCATTAATGGATTCCTTGAAACCATTTGATGTTTCACAATCTCTTCAATTAGCTCCTGGTATTCTTAAGGATTCAAACTCTGCTACAAGTATGCAGTTAGCTTGTGGTCTTGCATCTGATGTAGTTGCTGCTGCATTTGTTGCTTTAACTAGCCTTGTGAAGAGAAATGAACATGGAAATTTTATTGACCATGAATCAGTTAATCATATTCTCAACAATCCAGAAGTGATCGTGAAGTTGGTTAGAGATTATAGAGCTGCTAATAATTCACAATATGTACATAATGCGGGGTCATCCTTGGCGGCCTTTTCAAATCCATCGATTCCTATTCAAGGAGAAACCACTACACCTTCATCGGTTGTTTTTTCAGGCACTTCTTCCTATGCTCCCCCAATTGGAGGTCTGGTGGAACCTATTACTACCCAATGGCCTCCTAGGCCTGCAATGAGTTCAGCTATTGTTTCTTCTTCCATTGAGGTCCCTCCTGCAAGAAATGTAAACTACTATAAGAGCTTAATTCAACAACATGGAGGAGATAAACAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCCTCAGTCAGCAACAAACTATGAGACAACCTCCTACAATCATAGAGGTAAAGTATCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACACTTCTAAAGGATGTCGGAAGGGAGCTAACTGTGACTACCATCATGATGCATCATTTTAA 1224 0.4085 MRRLQKSKRVSWASDLDLCQVRLFLSEESPSQVGLNSQDHVQAKTSLLLHPDGAGSDDILPPGFEGTHAKSQSEIKLSQIPVIKWITPPKIEVNPTWRVAVGEESTEVEDQPQREMRVLEAIYPRISSIPQNPSVSMDVEESHCMDDQTALIPITPIEEEEAAAKALMDSLKPFDVSQSLQLAPGILKDSNSATSMQLACGLASDVVAAAFVALTSLVKRNEHGNFIDHESVNHILNNPEVIVKLVRDYRAANNSQYVHNAGSSLAAFSNPSIPIQGETTTPSSVVFSGTSSYAPPIGGLVEPITTQWPPRPAMSSAIVSSSIEVPPARNVNYYKSLIQQHGGDKQETLPYSSKRQIPQSATNYETTSYNHRGKVSKPKIMKPCIFFNTSKGCRKGANCDYHHDASF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0206 407 ProSiteProfiles Zinc finger C3H1-type profile. 378 406 IPR000571 GO:0046872
Gso6g0206 407 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 407 - -
Gso6g0206 407 MobiDBLite consensus disorder prediction 344 370 - -
Gso6g0206 407 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0206 Gso-Chr6 1963582 1969005 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gso6g0206 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0206 - - gmx:100798902 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0228 4 2072730 2075892 Gso6g0206 6 1963582 1969005 GST