Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0181 ATGAAGCTAAACTTAGAAGTAGCTAAAATTATCACTGCCATGGATTCTTTAATGGCTTCTCCTCTACCCCTTGGTATTCTTGTTCTACGTTGTTTCATGTTACTGTTAATGGTTTCTTGCAAAGCGAAGGGTTTGGTGGAACTTCCACCAAATGTTACGGTTCCAGCAGTGTTGGTGTTCGGAGATTCAATAATGGATACGGGGAACAACAACAACAACATGCAAACTCTTGCTAAGTGCAACTTCCCACCATATGGGAGAGATTTCGAAGGAGGCATCCCAACTGGTCGATTTGGTAATGGAAAGGTTCCATCAGACCTTGTAGCTGAAGAATTGGGCATTAAGGAACTTCTGCCAGCATATTTGGATCCAAATCTTCAACCCAGCGATCTCGTCACTGGTGTCTGCTTTGCATCCGGTGGTTCAGGGTACGATCCTCTCACATCTAAACTAGCGTCAGCTATATCGTTGACCGGTCAAATAGACATGTTCAAAGAATACATAAGAAAACTAAAAGGACTCGTTGGAGAGGACAAAACAAACTTCATCCTAGCCAATGGTATTGTTCTTGTTGTGGAAGGCAGCAACGACATTTCCAACACATACTTTTTGAGTCATGCTAGAGAAGTAGAATATGATATTCCTGCTTACACTGACTTAATGGTCAAGTCAGCTTCTAATTTCTTAAAGGAAATATATCAACTAGGTGGTCGGAGGATAGGGGTATTCAGTGCTCCACCAATTGGGTGTGTGCCATTTCAGAGAACACTGGTTGGAGGAATAGTTAGAAAATGTGCAGAAAAGTACAACGACGCGGCCAAGTTATTCAACAGCAAACTCGCAAAGGAGTTGGCTTCCCTTAACCGGAACTTGCCTAATGCCAGGATGGTTTATCTGGATGTTTACAACCCCCTACTTGATATCATTGTACATTACCAAAATTATGGATTTAAAGTGGGAGACAGAGGATGCTGTGGTACGGGCAAAATAGAAGCCGCAGTGTTATGCAACCCTTTGCATCCCACGTGTCCGGATGTGGGAGACTACGTTTTTTGGGATAGTTTTCATCCTTCAGAAAATGTTTACAGAAGGCTCGTAGCTCCTATTCTTCGAAAATATTTGTCCCAAAGTTTTTCAAGTTCTTCTTTAATACTTTTTTTTCTCGTTTTTACATCAATTTTTTTTAAAGTATTTGTAGCTGTGGTGAAACTACCACCAAATATAACATTTCCCGCAGTGATAGCTTTTGGAGATTCGATCGTTGACCCGGGCAACAACAACATGGTTAAAACACTTGTCAAGTGCGATTTCCCTCCTTACGGTAAAGATTTTGAGGGAGGGATTCCAACCGGTCGATTTTGCAACGGGAAAATCCCATCAGATTTGCTAGCTGAAGAACTGGGTATTAAGGAGCTTTTACCTGCTTATTTGGATCCAAATCTCAAACCAAGTGACCTTGTTACGGGAGTCTGCTTTGCTTCTGGTGCTTCCGGATACGATCCTTTAACGCCAAAAATAGCGTCGGTGATATCAATGTCGGAACAACTAGACATGTTCAAAGAATACATAGGGAAGCTTAAACACATTGTTGGAGAGGACAGAACAAATTTCATCCTAGCCAACAGTTTTTTCCTTGTGGTAGCTGGAAGTGACGACATTGCCAACACCTATTTTATCGCTCGCGTTCGACAATTACAATATGATATTCCAGCTTATACTGACCTTATGCTCCACTCTGCTTCTAATTTCGTTAAGGAATTATATGGACTTGGAGCACGCAGAATCGGAGTACTGAGTGCACCACCGATTGGATGCGTTCCATCACAGAGAACTCTAGCTGGAGGTTTACAAAGAGATTGCGCAGAAGAATACAATTACGCAGCCAAGTTGTTTAACTCCAAATTATCAAGGGAACTGGATTCTCTTAAGCATAACTTGCGCAATAGTAGGATCGTTTACATTGATGTTTACAACCCTCTAATGGATATCATTGTGAACTACCAACGTTATGGGTATAAAGTTGTGGATAGAGGATGCTGTGGCACAGGGAAATTGGAGGTGGCAGTGTTATGCAACCCTTTGGGTGCCACTTGTCCCGATGCTTCGCAATATGTTTTTTGGGACAGTTATCATCCCACCGAAGGAGTATACAGACAGCTCATAGTCCAAGTCCTTCAAAAATATTTGACTCGATTCTACTGA 2202 0.4192 MKLNLEVAKIITAMDSLMASPLPLGILVLRCFMLLLMVSCKAKGLVELPPNVTVPAVLVFGDSIMDTGNNNNNMQTLAKCNFPPYGRDFEGGIPTGRFGNGKVPSDLVAEELGIKELLPAYLDPNLQPSDLVTGVCFASGGSGYDPLTSKLASAISLTGQIDMFKEYIRKLKGLVGEDKTNFILANGIVLVVEGSNDISNTYFLSHAREVEYDIPAYTDLMVKSASNFLKEIYQLGGRRIGVFSAPPIGCVPFQRTLVGGIVRKCAEKYNDAAKLFNSKLAKELASLNRNLPNARMVYLDVYNPLLDIIVHYQNYGFKVGDRGCCGTGKIEAAVLCNPLHPTCPDVGDYVFWDSFHPSENVYRRLVAPILRKYLSQSFSSSSLILFFLVFTSIFFKVFVAVVKLPPNITFPAVIAFGDSIVDPGNNNMVKTLVKCDFPPYGKDFEGGIPTGRFCNGKIPSDLLAEELGIKELLPAYLDPNLKPSDLVTGVCFASGASGYDPLTPKIASVISMSEQLDMFKEYIGKLKHIVGEDRTNFILANSFFLVVAGSDDIANTYFIARVRQLQYDIPAYTDLMLHSASNFVKELYGLGARRIGVLSAPPIGCVPSQRTLAGGLQRDCAEEYNYAAKLFNSKLSRELDSLKHNLRNSRIVYIDVYNPLMDIIVNYQRYGYKVVDRGCCGTGKLEVAVLCNPLGATCPDASQYVFWDSYHPTEGVYRQLIVQVLQKYLTRFY* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0181 733 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 57 68 IPR008265 GO:0006629|GO:0016298
Gso6g0181 733 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 390 729 - -
Gso6g0181 733 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 31 376 - -
Gso6g0181 733 PANTHER GDSL ESTERASE/LIPASE EXL3 31 376 - -
Gso6g0181 733 PANTHER GDSL ESTERASE/LIPASE EXL3 390 729 - -
Gso6g0181 733 CDD SGNH_plant_lipase_like 55 373 IPR035669 -
Gso6g0181 733 Pfam GDSL-like Lipase/Acylhydrolase 413 719 IPR001087 GO:0016788
Gso6g0181 733 Pfam GDSL-like Lipase/Acylhydrolase 57 365 IPR001087 GO:0016788
Gso6g0181 733 Gene3D SGNH hydrolase 405 729 IPR036514 -
Gso6g0181 733 Gene3D SGNH hydrolase 49 374 IPR036514 -
Gso6g0181 733 CDD SGNH_plant_lipase_like 411 728 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0181 Gso-Chr6 1697462 1716145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0181 381 726 Pollen Coat Proteome AT1G75910 39.542 9.42e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0181 - - vvi:100264374 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1866 14 51091499 51095203 Gso6g0181 6 1697462 1716145 PCT
Gso17g2203 17 41743592 41748021 Gso6g0181 6 1697462 1716145 PCT
Gso6g0181 6 1697462 1716145 Gso14g1864 14 51071741 51077852 PCT
Gso6g0181 6 1697462 1716145 Gso17g2201 17 41721827 41726896 PCT