Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0179 ATGAAAGGCAATAATACACTTTTGTTGCATTTATTCTACACTACTCTCTTCCTGTTTCTTGTAGTGTCAAGTTCATCTTCAACAGGGAATGAAAGTAACGATGACACTAACAGTAAAGAAGTTTATATCGTGTACATGGGAGCTGCAGATTCAACAAAAGCTTCTCTTAAAAATGAGCACGCTCAGATTCTGAATTCAGTGCTAAGAAGGAATGAGAATGCCCTAGTACGGAACTACAAGCATGGTTTCTCTGGGTTCGCAGCTCGTCTATCAAAAGAGGAGGCAAACTCAATTGCTCAGAAACCTGGTGTGGTGTCTGTTTTCCCTGACCCCATTCTGAAGCTCCACACTACACGTTCATGGGATTTCCTCAAAAGCCAAACTCGTGTCAATATCGACACCAAACCAAATACGCTGTCCGGTTCTTCTTTTTCTTCATCAGACGTCATTCTTGGCGTCTTAGACACAGGCATATGGCCAGAGGCGGCGAGTTTTAGCGACAAGGGTTTCGGTCCTGTTCCATCCCGATGGAAAGGCACCTGCATGACATCAAAAGACTTCAATTCCTCTTGTTGTAACAGGAAGATAATTGGCGCGAGGTTTTACCCTAACCCAGAGGAGAAAACGGCAAGGGATTTCAACGGACATGGGACTCACGTTTCGTCGACGGCAGTGGGCGTGCCGGTGAGTGGCGCATCGTTCTATGGTCTGGCGGCGGGGACGGCAAGGGGTGGGTCCCCTGAGTCAAGGTTGGCGGTTTACAAAGTGTGTGGGGCTTTTGGGTCATGTCCTGGGTCGGCCATTCTTGCGGGGTTTGACGATGCCATTCACGACGGAGTGGATATCTTGTCGCTGTCGCTCGGTGGATTCGGTGGAACCAAAACCGATTTGACCACCGACCCGATTGCGATTGGAGCATTCCACTCCGTCCAGCGCGGCATCCTGGTGGTCTGCGCCGCCGGGAACGACGGAGAACCATTCACCGTTCTCAACGACGCACCTTGGATTTTAACCGTTGCAGCTTCCACCATCGACCGTGATCTTCAATCCGACGTGGTCTTGGGTAATAACCAAGTCGTCAAGGGAAGAGCCATAAATTTCTCCCCTCTTTTAAATTCTCCCGATTATCCAATGATATATGCTGAGTCTGCTGCCAGGGCAAATATCTCCAACATAACTGATGCAAGACAATGCCACCCAGATTCATTAGATCCAAAAAAAGTCATAGGGAAGATTGTGGTTTGTGATGGAAAAAATGACATTTATTATTCAACTGATGAGAAAATTGTCATAGTGAAGGCGTTGGGAGGAATAGGTCTGGTTCATATTACTGATCAATCTGGATCAGTAGCATTTTATTATGTGGACTTCCCAGTAACAGAGGTAAAATCAAAACATGGCGACGCAATCCTCCAGTACATCAACTCAACTAGCCATCCAGTGGGAACAATACTAGCAACAGTTACAATTCCTGATTATAAGCCTGCTCCCCGGGTGGGTTATTTTTCATCAAGAGGGCCTTCATTGATTACAAGCAATGTTCTCAAGCCTGATATTGCAGCCCCGGGAGTTAACATTCTCGCTGCATGGTTTGGAAATGACACATCAGAGGTTCCAAAAGGAAGAAAGCCCTCACTATATCGCATACTCTCAGGAACTTCCATGGCTACTCCACATGTTTCAGGGCTTGCATGCAGTGTCAAAAGAAAAAACCCCACTTGGAGTGCCTCCGCAATCAAATCTGCCATCATGACTTCAGCAATTCAAAATGACAATTTGAAGGGTCCCATAACAACGGATTCAGGGTTGATAGCCACACCTTATGACTATGGAGCAGGGGCAATTACAACATCTGAACCATTGCAACCGGGGCTAGTTTATGAAACCAACAACGTTGACTACTTGAACTATTTGTGTTACAATGGACTTAACATAACCATGATAAAGGTCATCTCCGGAACTGTCCCCGAGAATTTCAATTGTCCCAAGGATTCGAGCTCTGATCTCATCTCCAGCATCAACTACCCTTCCATAGCAGTAAACTTCACTGGCAAAGCAGACGCGGTCGTGAGTAGAACTGTCACAAACGTTGACGAAGAAGATGAAACAGTGTACTTCCCCGTTGTTGAAGCTCCTAGTGAAGTAATTGTCACACTCTTTCCATATAATCTTGAGTTTACGACAAGTATTAAAAAACAAAGCTACAATATTACTTTCAGACCGAAGACCTCCTTGAAGAAAGATTTGTTTGGATCTATCACTTGGAGTAACGACAAATATATGGTTCGAATTCCTTTTGTATTAACTAAATAG 2313 0.4527 MKGNNTLLLHLFYTTLFLFLVVSSSSSTGNESNDDTNSKEVYIVYMGAADSTKASLKNEHAQILNSVLRRNENALVRNYKHGFSGFAARLSKEEANSIAQKPGVVSVFPDPILKLHTTRSWDFLKSQTRVNIDTKPNTLSGSSFSSSDVILGVLDTGIWPEAASFSDKGFGPVPSRWKGTCMTSKDFNSSCCNRKIIGARFYPNPEEKTARDFNGHGTHVSSTAVGVPVSGASFYGLAAGTARGGSPESRLAVYKVCGAFGSCPGSAILAGFDDAIHDGVDILSLSLGGFGGTKTDLTTDPIAIGAFHSVQRGILVVCAAGNDGEPFTVLNDAPWILTVAASTIDRDLQSDVVLGNNQVVKGRAINFSPLLNSPDYPMIYAESAARANISNITDARQCHPDSLDPKKVIGKIVVCDGKNDIYYSTDEKIVIVKALGGIGLVHITDQSGSVAFYYVDFPVTEVKSKHGDAILQYINSTSHPVGTILATVTIPDYKPAPRVGYFSSRGPSLITSNVLKPDIAAPGVNILAAWFGNDTSEVPKGRKPSLYRILSGTSMATPHVSGLACSVKRKNPTWSASAIKSAIMTSAIQNDNLKGPITTDSGLIATPYDYGAGAITTSEPLQPGLVYETNNVDYLNYLCYNGLNITMIKVISGTVPENFNCPKDSSSDLISSINYPSIAVNFTGKADAVVSRTVTNVDEEDETVYFPVVEAPSEVIVTLFPYNLEFTTSIKKQSYNITFRPKTSLKKDLFGSITWSNDKYMVRIPFVLTK* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0179 770 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Gso6g0179 770 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Gso6g0179 770 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Gso6g0179 770 Pfam Peptidase inhibitor I9 41 116 IPR010259 -
Gso6g0179 770 ProSitePatterns Serine proteases, subtilase family, histidine active site. 216 226 IPR022398 -
Gso6g0179 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 768 IPR045051 -
Gso6g0179 770 Gene3D - 638 770 - -
Gso6g0179 770 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 60 768 - -
Gso6g0179 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Gso6g0179 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Gso6g0179 770 CDD Peptidases_S8_3 113 588 IPR034197 -
Gso6g0179 770 Gene3D Peptidase S8/S53 domain 148 634 IPR036852 GO:0004252|GO:0006508
Gso6g0179 770 CDD PA_subtilisin_like 351 484 - -
Gso6g0179 770 SUPERFAMILY Subtilisin-like 28 697 IPR036852 GO:0004252|GO:0006508
Gso6g0179 770 Gene3D - 345 491 - -
Gso6g0179 770 Pfam Fibronectin type-III domain 673 767 IPR041469 -
Gso6g0179 770 Pfam Subtilase family 146 602 IPR000209 GO:0006508|GO:0008236
Gso6g0179 770 ProSiteProfiles Serine proteases, subtilase domain profile. 120 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0179 Gso-Chr6 1683875 1687210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0179 35 769 Subtilisin-like Serine Gene Family AT1G20150 49.735 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0179 K25898 - gmx:547552 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0199 4 1767331 1771099 Gso6g0179 6 1683875 1687210 GST