Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0178 ATGAAAGGCAATGATACACTTTTGTTGCATTTATTCTACACTCTCTTGTTGTTTCTTGGAGTACGAAGTTCATCTTCAGCAGGGAATGGAAGTAACGATGTCACTAACCGTAAAGAAGTTTATATCGTGTATATGGGAGCCGCAGATTCAACAAATGCTTCCTTCCGGAATGACCATGCTCAGGTTCTCAATTCAGTGCTAAGAAGGAATGAGAATGCTCTAGTACGGAACTACAAACATGGTTTCTCAGGGTTCGCAGCTCGTCTATCAAAAAAGGAGGCAACCTCAATTGCTCAGAAACCTGGTGTGGTGTCTGTTTTCCCTGACCCAGTTCTGAAACTCCACACTACACGGTCATGGGATTTCCTCAAATACCAAACTCAAGTCAAAATTGACACCAAACCAAATGCGGTCTCCAAATCTTCTTCCGTCATTGGTATCTTAGACACAGGTATATGGCCAGAGGCGGCGAGTTTTAGCGACAAGGGTATGGGTCCTGTTCCATCTCGTTGGAAAGGCACCTGCATGAAATCACAAGACTTCTATTCCTCCAATTGTAACAGGAAGCTAATTGGCGCAAGGTATTATGCTGACCCTAATGACTCGGGGGACAACACGGCTAGGGATTCTAATGGGCATGGAACCCATGTGGCGGGAACGGCAGCTGGTGTTATGGTGACTAACGCATCTTACTACGGTGTTGCGACAGGGTGTGCAAAGGGTGGGTCCCCAGAGTCAAGATTAGCGGTTTACAGAGTGTGTTCTAACTTTGGGTGTCGTGGGTCGAGCATTCTTGCTGCGTTTGACGATGCCATTGCGGACGGAGTGGATGTGTTGTCGGTGTCACTAGGTGCATCCACTGGGTTTCGACCCGACTTGACGTCCGATCCGATTTCGCTTGGAGCATTCCATGCTATGGAGCATGGCATCCTCGTCGTCTGCTCTGCTGGGAACGATGGACCCAGCTCCTACACCCTTGTCAACGATGCACCTTGGATTTTAACTGTTGCAGCTTCCACCATTGATCGAAATTTTCTATCCAACATCGTCTTAGGTGATAACAAAATCATCAAGGGCAAAGCTATAAATCTATCCCCTCTTTCAAATTCTCCCAAGTATCCACTGATATACGGTGAGTCTGCCAAGGCGAATAGCACCAGCTTAGCTGAAGCAAGACAATGCCACCCAAATTCATTAGATGGGAATAAAGTCAAAGGAAAGATCGTGGTCTGTGATGACAAAAATGATAAATATTCAACTAGAAAAAAAGTTGCCACGGTGAAAGCGGTGGGAGGAATTGGTCTGGTTCATATTACTGACCAAAATGAAGCAATAGCATCAAATTATGGGGACTTCCCAGCAACGGTCATAAGTTCAAAAGATGGCGTCACAATCCTCCAGTACATCAATTCAACCAGCAATCCAGTGGCAACTATTCTAGCAACAACATCAGTTCTTGATTATAAGCCTGCTCCCCTGGTGCCAAACTTCTCATCAAGAGGGCCTTCATCGCTTTCAAGCAATATTCTCAAGCCTGATATTGCAGCTCCGGGAGTTAACATTCTCGCTGCATGGATTGGAAATGGCACAGAAGTGGTTCCCAAAGGAAAAAAGCCCTCACTATACAAGATAATCTCAGGGACTTCCATGGCTTGCCCGCATGTTTCAGGGCTTGCAAGCAGTGTCAAAACACGCAACCCCACTTGGAGTGCCTCCTCAATCAAATCTGCCATCATGACTTCAGCAATTCAAAGCAACAACTTGAAGGCTCCCATAACAACGGAATCAGGGTCGGTAGCCACACCTTATGACTATGGAGCAGGGGAAATGACAACATCTGAACCATTGCAACCGGGGCTAGTTTATGAAACCAGCTCCGTTGACTACTTGAACTTCTTGTGTTACATTGGATTCAACGTAACCACGGTTAAAGTCATCTCCAAAACCGTCCCTCGTAATTTCAATTGCCCCAAGGATTTGAGCTCTGATCATATCTCTAACATCAACTACCCTTCCATAGCAATAAACTTCAGTGGCAAAAGAGCCGTGAACTTGAGTAGAACTGTTACAAACGTTGGCGAAGATGATGAAACAGTGTACTCCCCCATTGTTGATGCTCCCAGTGGAGTGCATGTCACATTAACTCCAAATAAACTTCGGTTTACGAAAAGTAGTAAAAAACTAAGCTACCGAGTTATTTTTTCATCAACTCTGACCTCCTTGAAGGAAGATCTGTTTGGATCTATTACTTGGAGTAACGGTAAGTATATGGTTCGAAGTCCTTTTGTGTTAACTAAGTGA 2301 0.4507 MKGNDTLLLHLFYTLLLFLGVRSSSSAGNGSNDVTNRKEVYIVYMGAADSTNASFRNDHAQVLNSVLRRNENALVRNYKHGFSGFAARLSKKEATSIAQKPGVVSVFPDPVLKLHTTRSWDFLKYQTQVKIDTKPNAVSKSSSVIGILDTGIWPEAASFSDKGMGPVPSRWKGTCMKSQDFYSSNCNRKLIGARYYADPNDSGDNTARDSNGHGTHVAGTAAGVMVTNASYYGVATGCAKGGSPESRLAVYRVCSNFGCRGSSILAAFDDAIADGVDVLSVSLGASTGFRPDLTSDPISLGAFHAMEHGILVVCSAGNDGPSSYTLVNDAPWILTVAASTIDRNFLSNIVLGDNKIIKGKAINLSPLSNSPKYPLIYGESAKANSTSLAEARQCHPNSLDGNKVKGKIVVCDDKNDKYSTRKKVATVKAVGGIGLVHITDQNEAIASNYGDFPATVISSKDGVTILQYINSTSNPVATILATTSVLDYKPAPLVPNFSSRGPSSLSSNILKPDIAAPGVNILAAWIGNGTEVVPKGKKPSLYKIISGTSMACPHVSGLASSVKTRNPTWSASSIKSAIMTSAIQSNNLKAPITTESGSVATPYDYGAGEMTTSEPLQPGLVYETSSVDYLNFLCYIGFNVTTVKVISKTVPRNFNCPKDLSSDHISNINYPSIAINFSGKRAVNLSRTVTNVGEDDETVYSPIVDAPSGVHVTLTPNKLRFTKSSKKLSYRVIFSSTLTSLKEDLFGSITWSNGKYMVRSPFVLTK* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0178 766 CDD Peptidases_S8_3 112 583 IPR034197 -
Gso6g0178 766 Gene3D - 633 766 - -
Gso6g0178 766 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Gso6g0178 766 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Gso6g0178 766 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Gso6g0178 766 Pfam Peptidase inhibitor I9 40 115 IPR010259 -
Gso6g0178 766 ProSiteProfiles Serine proteases, subtilase domain profile. 119 616 - -
Gso6g0178 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 115 IPR037045 -
Gso6g0178 766 Pfam PA domain 373 464 IPR003137 -
Gso6g0178 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 764 IPR045051 -
Gso6g0178 766 CDD PA_subtilisin_like 348 479 - -
Gso6g0178 766 Pfam Subtilase family 142 608 IPR000209 GO:0006508|GO:0008236
Gso6g0178 766 Pfam Fibronectin type-III domain 667 763 IPR041469 -
Gso6g0178 766 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 29 764 - -
Gso6g0178 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Gso6g0178 766 SUPERFAMILY Subtilisin-like 114 614 IPR036852 GO:0004252|GO:0006508
Gso6g0178 766 ProSitePatterns Serine proteases, subtilase family, histidine active site. 213 223 IPR022398 -
Gso6g0178 766 Gene3D - 342 486 - -
Gso6g0178 766 Gene3D Peptidase S8/S53 domain 144 629 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0178 Gso-Chr6 1672603 1677109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0178 35 765 Subtilisin-like Serine Gene Family AT1G20150 53.714 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0178 K25898 - gmx:547696 1485.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0198 4 1754441 1758462 Gso6g0178 6 1672603 1677109 GST