Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0130 ATGCATGATTTGGGAGCTACTATGCCTGTGGGAATGGATTTTCCTCCTCCGTTTACTATGTTAGAGGACAAAGACAGTGCATTTGTGGTGGATGATCAGAAATCAGGGGATATAAAACCAATGACAAAGGGTAAGCCTCCACGCCATGCTTCGGGTTTGAGGCACAGCGTTAGCACCACCAGATTGCTGGCTGTAGCAGATTTGAGTTTGGATGTGGGGGTTACTGGGAGCAAGTCATCTTCTGAAGAAAAGACGGAGTTTCTACCAATATTTCGGTCAGGAAGCTGCGCCGAAAGAGGACCTAAACAATATATGGAAGACGAACACATATGTATAGATAATCTTATTCAGCATATAGGTCCTGCTTCAACTATTCCTTTACCTGGAGCTTTTTATGGGGTGTTTGATGGTCATGGGGGTACAGATGCGGCTTTGTTCATACGAAATAACATCCTCAGATTCATAGTTGAGGACTCCCATTTTCCAACTTGTGTGGGGGAGGCAATTACAAGTGCGTTTCTAAAAGCCGATTTTGCATTTGCAGATTCTAGTTCGCTTGATATCTCTTCTGGCACCACTGCTTTAACTGCCCTTGTATTTGGAAGGACCATGATAGTTGCCAATGCTGGGGATTGTCGAGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAGCCAGATTGCATTTCGGAGAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTATACGATGGATACTTGAATGGCCAGTTATCTGTTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGTTCCAAGGGTTCTGCCTGCCCCTTGAGTGCTGAGCCAGAGCTGCAGGAAATCAACCTGACCGAGGATGATGAGTTCTTGATTATGGGCTGCGACGGCCTATGGGATGTAATGAGTAACCAATGTGCTGTAACCATGGCAAGGAAAGAATTGATGATACATAATGATCCTCAAAGGTGTTCTAGAGAGCTGGTCAGAGAGGCTCTTAAGCGTAACTCGTGCGATAATTTGACAGTTATCGTGATATGTTTCTCCCCAGATCCTCCTCCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGATGTATTGGACTGTTAG 1158 0.4577 MHDLGATMPVGMDFPPPFTMLEDKDSAFVVDDQKSGDIKPMTKGKPPRHASGLRHSVSTTRLLAVADLSLDVGVTGSKSSSEEKTEFLPIFRSGSCAERGPKQYMEDEHICIDNLIQHIGPASTIPLPGAFYGVFDGHGGTDAALFIRNNILRFIVEDSHFPTCVGEAITSAFLKADFAFADSSSLDISSGTTALTALVFGRTMIVANAGDCRAVLGRRGRAIEMSKDQKPDCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGSKGSACPLSAEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPPRIETPPSRVRRSISAEGLNLLKDVLDC* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0130 385 CDD PP2Cc 91 352 IPR001932 -
Gso6g0130 385 MobiDBLite consensus disorder prediction 32 53 - -
Gso6g0130 385 SMART PP2C_4 82 350 IPR001932 -
Gso6g0130 385 Pfam Protein phosphatase 2C 93 344 IPR001932 -
Gso6g0130 385 ProSiteProfiles PPM-type phosphatase domain profile. 92 352 IPR001932 -
Gso6g0130 385 SMART PP2C_SIG_2 107 352 IPR001932 -
Gso6g0130 385 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 8 374 - -
Gso6g0130 385 Gene3D - 70 355 IPR036457 -
Gso6g0130 385 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Gso6g0130 385 PANTHER PROTEIN PHOSPHATASE 2C 8 374 IPR015655 GO:0004722|GO:0006470
Gso6g0130 385 SUPERFAMILY PP2C-like 86 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0130 Gso-Chr6 1211446 1214710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0130 10 384 PP2C-type Phosphatase Gene Family AT2G33700 71.279 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0130 K14803 - gmx:100778015 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0142 4 1227316 1230666 Gso6g0130 6 1211446 1214710 GST