Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0110 ATGTTAGTAAATTCATCCATCATAACACTTCACAAATTTCACACACGTATGCTATATAATCAGTGTGACTTTAAGTTGGATCTCAAATTCTCACTCATGGCTGCTAATTACAACAACAATATCATTAGTGCTGCTGCTGCTGCTTTCATGACACCTGCAGCCCTACACCTCCAGCCCCAGTCCGACGACGACGACGGAGAAGGACCCTTCTCCACCCAGCGGCGCCCTCGCGGGCGGCCCATGGGCTCCAAGAACAAGCCCAAGCCGCCCGTCATAGTCACGCGCGACAGCCCCAACGTCCTCCGCTCGCACGTTCTGGAGGTCTCCCCCGGCGCCGACGTGGTGGAGAGCCTCTCCAACTATGCGCGCCGCCGAGGGAGGGGAGTGTCCGTGCTCAGTGGCTCCGGCACGGTGGCCAACGTCGTGCTCCGTCAACCGGCCGGGAGCGTCCTCACGCTCCACGGCCGGTTTGAGATAGTTTCCATGACGGGGACGGTGCTCCCGCCTCCGGCGCCACCCGGTTCGGACGGGTTGTCGGTTTATCTGTCAGGGGCGCAGGGACAGGTGGTTGGGGGCGTGGTGGTGGCCCCTCTGGTGGCTTCGAGTCACGTGGTTTTGGTGGCTGCTTCCTTCGCTAACGCCATGTTCGAAAGGTTACCCTTGCCCTTGAATCAGCATGATGATGATGATCAAGTTCTGCAAGAGGCACCACGTGGCGTCATGGGAACTGAACAGGTGGCAGATGGAAGGAACTATCCCTTCTCCGCGTCGCTGCAGGGTGAAGTATTTGGATGGGGTGGAACTGGAACTACATCATCAACATCAACTGCACCACCCAAAACTCATCCTTTCTAG 855 0.5766 MLVNSSIITLHKFHTRMLYNQCDFKLDLKFSLMAANYNNNIISAAAAAFMTPAALHLQPQSDDDDGEGPFSTQRRPRGRPMGSKNKPKPPVIVTRDSPNVLRSHVLEVSPGADVVESLSNYARRRGRGVSVLSGSGTVANVVLRQPAGSVLTLHGRFEIVSMTGTVLPPPAPPGSDGLSVYLSGAQGQVVGGVVVAPLVASSHVVLVAASFANAMFERLPLPLNQHDDDDQVLQEAPRGVMGTEQVADGRNYPFSASLQGEVFGWGGTGTTSSTSTAPPKTHPF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0110 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 67 267 - -
Gso6g0110 284 MobiDBLite consensus disorder prediction 57 96 - -
Gso6g0110 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 212 IPR005175 -
Gso6g0110 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 222 - -
Gso6g0110 284 Gene3D - 101 227 - -
Gso6g0110 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 67 267 IPR014476 GO:0003680
Gso6g0110 284 CDD DUF296 102 183 IPR005175 -
Gso6g0110 284 ProSiteProfiles PPC domain profile profile. 98 238 IPR005175 -
Gso6g0110 284 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0110 Gso-Chr6 1076311 1077534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0110 58 221 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 71.348 5.67e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0110 - - gsj:114413988 482.256