Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g0096 | ATGGCTTCTGCAGAAGTAGAGTTCCGATGCTTTGTTGGTGGGCTTGCTTGGGCCACCGACCACGATGCTCTCGAGAAAGCCTTCTCTCAATTTGGCGAAATCGTCGAATCGAAGGTCATCAACGATCGTGAAACTGGAAGATCCAGAGGGTTTGGATTTGTGACCTTCGCCACAGAGCAGGCGATGAGAGACGCAATTGAAGGAATGAACGGCCAGAACCTCGACGGTCGTAATATAACCGTGAACGAGGCTCAATCCCGTGGAAAAGGTGGCGGCGGCGGTGGCGGCGGCGGTTACGGAGGAGGTGGTGGTGGTTACGGTGGCGGCGGAGGTTACAGCCGCGGTGGAGGAGGATATGGTGGCGGAGGAGGCCGCCGTGAAGGTGGTTATAACCGCAACGGTGGTGGAGGAGGATATGGTGGCGGTGGCGGCGGATATGGAGGTGGTGGAGGTTATGGTGGCGGTGGGAGAGACCGTGGATATGGTGGTGATGGTGGGTCCCGCTACTCGAGAGGAGGCGGTGGTTCGGATGGAGGAAGCTGGAGGAATTAA | 552 | 0.5797 | MASAEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGKGGGGGGGGGYGGGGGGYGGGGGYSRGGGGYGGGGGRREGGYNRNGGGGGYGGGGGGYGGGGGYGGGGRDRGYGGDGGSRYSRGGGGSDGGSWRN* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g0096 | 183 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 8 | 86 | IPR000504 | GO:0003723 | |
Gso6g0096 | 183 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN GRP1A-LIKE | 1 | 132 | - | - | |
Gso6g0096 | 183 | Gene3D | - | 2 | 121 | IPR012677 | - | |
Gso6g0096 | 183 | SUPERFAMILY | RNA-binding domain, RBD | 8 | 118 | IPR035979 | GO:0003676 | |
Gso6g0096 | 183 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 11 | 79 | IPR000504 | GO:0003723 | |
Gso6g0096 | 183 | SMART | rrm1_1 | 9 | 82 | IPR000504 | GO:0003723 | |
Gso6g0096 | 183 | MobiDBLite | consensus disorder prediction | 148 | 183 | - | - | |
Gso6g0096 | 183 | PANTHER | TRANSFORMER-2-RELATED | 1 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g0096 | Gso-Chr6 | 939217 | 940527 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g0096 | 10 | 89 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 36.250 | 8.42e-07 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g0096 | - | K13195 | gmx:100777821 | 172.94 |