Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0080 ATGACTATGGCTTGTTCAAGTGGAACATCTTCAGGGACGTCGTCGGAGCTGCAGGGTATGATGGATCAGAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCGGCAAGGCGATCTCGAATGAGGAAGCAGAAGCACTTGGATGATCTAGCATCGCAGCTGACTCAGCTCAGGAGCCAGAATCAGCAGCTTCTCACGTCTGTGAACCTCACCAGCCACAAGTACTTGGCGGTGGAGGCTGAGAACTCTGTTTTGAGAGCACAAGTGAACGAGCTCAGCCACAGGTTGGACTCTCTCAACCAGATCATCCACTTGTTGAATTTCTTTGAGCCCGATGCTAGTACTAGTACCTTCTTCAACAACCCTTTCAATTTCAGCCACCCGATTATGGCTTCAGCAGACATGTTGCAGTACTGA 417 0.4964 MTMACSSGTSSGTSSELQGMMDQRKRKRMISNRESARRSRMRKQKHLDDLASQLTQLRSQNQQLLTSVNLTSHKYLAVEAENSVLRAQVNELSHRLDSLNQIIHLLNFFEPDASTSTFFNNPFNFSHPIMASADMLQY* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0080 138 MobiDBLite consensus disorder prediction 1 47 - -
Gso6g0080 138 Gene3D - 22 77 - -
Gso6g0080 138 PANTHER BZIP TRANSCRIPTION FACTOR 9 136 - -
Gso6g0080 138 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Gso6g0080 138 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 136 - -
Gso6g0080 138 MobiDBLite consensus disorder prediction 1 19 - -
Gso6g0080 138 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Gso6g0080 138 SUPERFAMILY Leucine zipper domain 24 75 IPR046347 GO:0003700|GO:0006355
Gso6g0080 138 Coils Coil 47 67 - -
Gso6g0080 138 MobiDBLite consensus disorder prediction 20 47 - -
Gso6g0080 138 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Gso6g0080 138 Pfam bZIP transcription factor 24 69 IPR004827 GO:0003700|GO:0006355
Gso6g0080 138 Coils Coil 82 102 - -
Gso6g0080 138 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0080 Gso-Chr6 813625 814707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0080 18 138 bZIP Transcription Factor Family AT4G34590 50.360 5.16e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso6g0080 bZIP_1 5.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0080 K25786 - gmx:121175032 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0089 4 821673 822948 Gso6g0080 6 813625 814707 GST