Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0055 ATGATGGCTATTCGTTTGCCAAGTGCCTTGAGTGCTAGACACATTCTTCGCAGATCTAATGCAGCTGCAACATCACTGGATGTGCCTAAAGGGTACTTTGCTGTGTATGTAGGAGAAGGTGAAAAGAAGAGATTTGTGATACCAGTGTCATTGTTGAATCAGCCTTCATTTCAAGAACTGCTAAGTATAGCTGAGGAAGAATTTGGCTTCACTCATCCAATGGGTGGCCTTACCATTCCCTGCACAGAAGACATTTTTGTTAACATCACCTCTGGCTTACATATATAG 288 0.4236 MMAIRLPSALSARHILRRSNAAATSLDVPKGYFAVYVGEGEKKRFVIPVSLLNQPSFQELLSIAEEEFGFTHPMGGLTIPCTEDIFVNITSGLHI* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0055 95 PANTHER - 11 93 - -
Gso6g0055 95 Pfam Auxin responsive protein 17 90 IPR003676 GO:0009733
Gso6g0055 95 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0055 Gso-Chr6 538532 539092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0055 27 86 Calmodulin-binding Proteins AT3G43120 56.667 1.56e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0055 K14488 - gmx:100306459 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0062 4 541009 541733 Gso6g0055 6 538532 539092 GST