Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0053 ATGGCTATTCGATTGCATTGTGTTTTGAGTCCTAAACACATTCTTCGCCGATCTAACCTGTTTGCAAATCATGCAGCTGCAACATCACTGGATGTGCCTAAAGGGCACTTTGCTGTGTACGTAGGAGAGGGTGAAAAGAAGAGATTTGTGATACCAGTGGCGGACCTACATTACTTTAAGGTGTCATTGTTGAATCAACCTTCATTTCAGGAACCGCTAAGTATAGCCGAGGAAGAATTTGGTTTCACTCATCCAATGGGTGGCCTTACTATAAGACATTTTCCTTAA 288 0.4236 MAIRLHCVLSPKHILRRSNLFANHAAATSLDVPKGHFAVYVGEGEKKRFVIPVADLHYFKVSLLNQPSFQEPLSIAEEEFGFTHPMGGLTIRHFP* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0053 95 Pfam Auxin responsive protein 19 91 IPR003676 GO:0009733
Gso6g0053 95 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 91 IPR003676 GO:0009733
Gso6g0053 95 PANTHER - 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0053 Gso-Chr6 531616 532067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0053 31 91 Calmodulin-binding Proteins AT3G43120 47.541 1.84e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0053 K14488 - gsj:114414444 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0144 4 1244151 1247032 Gso6g0053 6 531616 532067 GST