Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0052 ATGGGTATTCGTCTGCCAATATTCATGGCTCTTCATGCTAACAAGATATTCAAGTGGCAGCAGCATCTCCATAGTAGAAACCACTCGAATGTTCCAAAGGGTCACATAGTAGTGTATGTTGGAGAGGCTCAAAAGAAGAGGTTTGTGGTTCCAATATCTTACTTGAACCATCCTTCGTTTGTTGACTTGCTAAACCGAGTCGTGGAAGAATTTGGCTACAATCATCCAATGGGCGGTCTCACAATCCCTTGCAAAGAAGAGGCATTCATCACTCTCACCTCTCAACTACGTGCCTCCTGA 300 0.4433 MGIRLPIFMALHANKIFKWQQHLHSRNHSNVPKGHIVVYVGEAQKKRFVVPISYLNHPSFVDLLNRVVEEFGYNHPMGGLTIPCKEEAFITLTSQLRAS* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0052 99 Pfam Auxin responsive protein 15 94 IPR003676 GO:0009733
Gso6g0052 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 98 IPR003676 GO:0009733
Gso6g0052 99 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0052 Gso-Chr6 504024 504323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0052 30 89 Calmodulin-binding Proteins AT5G20810 50.000 5.32e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0052 K14488 - gmx:102662892 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0058 4 516151 516781 Gso6g0052 6 504024 504323 GST