Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0021 ATGGTGAGTGGTGAGCACAATCTGGCAATGCAACTGTCAAGCCCAAGAATGAAGCAACCAACTGTTTCCGATCAGAGCCTATCCAAGACTCGCATCTCACCTTCCCGCCACAACATCCGTTCCAACAAGTCTGGGAGAAGTAGGAGGAAAAACACTAACCCTAGTACTAGTACTTCCTTCCCTTCCTTCAACCTTCGCCCATATGATCACATCAATGACCACCAGAGTTCTAATAGTCCATATTACAAGGGTCTCACTGACCAATCCCTTGCTATCCCTGAGCCTCAGCTTCATACCCCTACCACTACCACTGATCACCTTCTTTCTAGTCCATATTATAAAGGTCTTCTTGCTCTTAAAATTAGTTCTTGGACCCCTGACGACCATCCTATTCCTTTTCCTCCCAACAACTCCTTTTCATACCTCCCTAGTCCTTACTATAGAGGTCTTCTCACCGATTACAGTGCCCTTCTATCATCAATTGATCCTCCTCCTTTCAGTATCAAAACTACCCCACCAGGAGTACCCACTTTGAAGGACTTGATTCTCGATGCAGCTCATCATCACGTTGACTTTCTTACCGAAGAAAGTGAAGTTGGGAATTATTCATTAGAAGAAATTGATGTGGAGGTGATGGATGAAGAGAAGCCTTTGAGAGAGATTAGTGTGTTAGAAGACAAAGCATCAGAGAAAATGATTTTGGAGGAGATGGTGATTGTAGAGAAGCCATTGAGGGAGAGTGTCTTGGTGGAAAAGGAAATGATTATTGTAGAGAAGCCATTGAGGGAGAGTGTCTTGGTGGAAAAGGAAATGATTATTGAAGAGAAACCATTGAGGGAGAGAGTATCAGAAACAGAAAGAAGCGACCATGTAGAGGAGAAGAAGGCCTTAAGCTTGTCTGTTTCAGAATCACAATGCGAAGAGGGTGGAAATGTCTACCAGTATACTTGGGCAACCAAATACCAGCCCATGTCCTTAGATGACTTCATCTGCAACAAAGACAACGCCCTTCAGCTCAAAGCAAAGGTGAAAGAGGGTTGTGGCTGCAGTCATTTTATATTTGAAGGACCACCAAGTGTTGGAAAGAGATCCATGATACGGGCTATGCTTCGAGAGGTATTTGGCGCCGACAAGGTGCAGGTCATAGAAGAATGTAGAAACTTCAATATGAAGGGTGAAATGGTGAATAATCTCCAAGTGCGAGTGAAGAAATCACTCCACCATGTTGAGGTGAATCTGTCAGAGACAAAGGGATATGAAAAGCATGTAATTGTTGATTTATTCAAGGAAACATATGGCCAGCTCATAAATAACTCGGAGCCTTGTTGCCCAGAGAACTGCAAAGCAATAATTTTGTATGAGGCGGAGAAACTATCCATAGAATCCTTGTTGTATATTAAGTGGTTACTAGAGAAGTACAAAGGCTGTAATAAGGTATTCTTTTGTTGCTCTGATGAATCAAAGCTCCAACCTGTCAAGCCACTTTGCATCACTGTCCGCCTTTCATCACCATCAACCCAAGAGCTTGTTCAGATTTTGGAAAATATTGGAAAAGAGGAAGGAATAAAATTATCACGCAACTTAGTGGAGAAGATAATCTTGAGGTCCAAAAACAATCTACGCCAAGCCATTCGATCGTTGGAGGCCACTTGCCGAAATAAGGATGCTGTCAAAGACGACGATTTAATTCTAACTGGGTGGGAGGAAGATATTTTTAATATTGCCAAAAAAGTAGCCGAAGAGCAAAGTCCACGACAGTTGTACGTCATTCGTAGAAAACTTCAAAGTCTTATGATTCATGATGTTCCTCCCGACTTTATTTACAAGTCATTGGTACCAGAGTTAACGAATCTAGTTGATGAATCGCTACGGGCAGGGGTTGCCAAACTCGACAAGGAGTTCATTAGACCTAGTGACATCAAATTTCAAACTATGAAGCAGTTCGGTCATGCTCAAAACAAACAAGCGGAATCGGATGAGAAGAACTATGATTCAACCAATCAGAATAGGTTAACTTACTTAAAAGTCGAAGAGTTTATAGCGAAATTCATGAGTTGGTACAAGAATTCGTCTGAAAAAGGCAATAAACAGTAG 2094 0.4198 MVSGEHNLAMQLSSPRMKQPTVSDQSLSKTRISPSRHNIRSNKSGRSRRKNTNPSTSTSFPSFNLRPYDHINDHQSSNSPYYKGLTDQSLAIPEPQLHTPTTTTDHLLSSPYYKGLLALKISSWTPDDHPIPFPPNNSFSYLPSPYYRGLLTDYSALLSSIDPPPFSIKTTPPGVPTLKDLILDAAHHHVDFLTEESEVGNYSLEEIDVEVMDEEKPLREISVLEDKASEKMILEEMVIVEKPLRESVLVEKEMIIVEKPLRESVLVEKEMIIEEKPLRERVSETERSDHVEEKKALSLSVSESQCEEGGNVYQYTWATKYQPMSLDDFICNKDNALQLKAKVKEGCGCSHFIFEGPPSVGKRSMIRAMLREVFGADKVQVIEECRNFNMKGEMVNNLQVRVKKSLHHVEVNLSETKGYEKHVIVDLFKETYGQLINNSEPCCPENCKAIILYEAEKLSIESLLYIKWLLEKYKGCNKVFFCCSDESKLQPVKPLCITVRLSSPSTQELVQILENIGKEEGIKLSRNLVEKIILRSKNNLRQAIRSLEATCRNKDAVKDDDLILTGWEEDIFNIAKKVAEEQSPRQLYVIRRKLQSLMIHDVPPDFIYKSLVPELTNLVDESLRAGVAKLDKEFIRPSDIKFQTMKQFGHAQNKQAESDEKNYDSTNQNRLTYLKVEEFIAKFMSWYKNSSEKGNKQ* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0021 697 MobiDBLite consensus disorder prediction 1 40 - -
Gso6g0021 697 MobiDBLite consensus disorder prediction 48 85 - -
Gso6g0021 697 PANTHER OS10G0574500 PROTEIN 134 691 - -
Gso6g0021 697 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 134 691 - -
Gso6g0021 697 Gene3D - 505 565 - -
Gso6g0021 697 Gene3D - 315 504 IPR027417 -
Gso6g0021 697 MobiDBLite consensus disorder prediction 1 85 - -
Gso6g0021 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 562 IPR027417 -
Gso6g0021 697 SUPERFAMILY post-AAA+ oligomerization domain-like 566 629 IPR008921 GO:0003677|GO:0006260
Gso6g0021 697 Gene3D - 566 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0021 Gso-Chr6 218695 228262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0021 317 689 Core DNA Replication Machinery Family AT5G27740 29.708 9.96e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0021 K10756 - gmx:102664389 1350.5