Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2123 ATGAGGTGGTGCAGCCAGGTCTTCTCTGTGTCTGGGTCCGGTGCACATGCACATGCACTCGCTCTCGCTCCTATAGTTACTGCTTCTTTTTCCAACACAAGTCTTGTGTTGCAATTCCAAAAGCCTCTCTTCAAATTCAGCAACTCCTCTTCTCTCGCTCTTACCCATCGTAAGCTGTTACCCTCTGCACTGCCACTAACGCAGCCCTCAAGTTCAAGGGAGGATTTTGATTTCGTGGTCGTCAATTTCTACCACTTTGTATTCATCCAAGACCCACAAGCTGAAGTCGACAAACACCGTTCTTTCTTGCAATTGGAGTATAGCGGGCCATCAAAAGATGCTATGACGTATGTCAACTGGTTAAGAAAGGATAACAGGTTTTCTGACATCTTGGTTCAGATATCTCCATCAGAAAAGGGACATACCTTTCCAACATTGAAGTTGCGTTATAAGCCTTCATTAGTACAGTTTGAAGGTGGTATGTCACATCTTTCATTGCTTGATCCTTCAATGCGGGCAATACCTTTATCACCTTCAGAATGGAGAGATAGATTGGAATCAATCAATAAAACTGATCTTACAGCAAAAGATAACTCAAACAGAAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGGCTCAGCGACCTAGTGTGGACTGCTTTAGGAACACTTCATTTGGTCTGTCTCGGGAAGAGATCACTGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAACATATTGATGTATTGCACTGGAGGGATTCGCTGTGATGTATATTCTTCAATACTAAGGCAGCAGGGATTTCAGAATTTGTATACTCTGAAGGGAGGTGTTTCTCACTATCTAAAGAATGAAGGCCCTGCCGAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTATCTCTCCCTCCTTCTATTTACTATACCGGGGCCACAACTGAAGCAGAGTCAACTCCAGTTTCTGGAGATGATAATTTTGCAAAATGCTACGTATGTAGTTTGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGATTGTAATTTGCTTTTTCTATGCTGCGGACAATGTGCAGAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACTACTATCGGGATATGGATTTTCAAGGGAAAATGAAAATTTCAGCTTGA 1260 0.4159 MRWCSQVFSVSGSGAHAHALALAPIVTASFSNTSLVLQFQKPLFKFSNSSSLALTHRKLLPSALPLTQPSSSREDFDFVVVNFYHFVFIQDPQAEVDKHRSFLQLEYSGPSKDAMTYVNWLRKDNRFSDILVQISPSEKGHTFPTLKLRYKPSLVQFEGGMSHLSLLDPSMRAIPLSPSEWRDRLESINKTDLTAKDNSNRNYILLDVRNGYEWDIGHFRGAQRPSVDCFRNTSFGLSREEITASDPLSNVDKEKANILMYCTGGIRCDVYSSILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSIYYTGATTEAESTPVSGDDNFAKCYVCSLEVSELRHRNCANLDCNLLFLCCGQCAEDLRGCCCLTCTTAPRLRPVLNGMQRYKKWHYYRDMDFQGKMKISA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2123 419 Gene3D - 168 327 IPR036873 -
Gso5g2123 419 CDD RHOD_YceA 176 295 - -
Gso5g2123 419 ProSiteProfiles Rhodanese domain profile. 199 302 IPR001763 -
Gso5g2123 419 SMART rhod_4 189 299 IPR001763 -
Gso5g2123 419 Pfam Rhodanase C-terminal 304 385 IPR022111 -
Gso5g2123 419 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 72 415 IPR020936 -
Gso5g2123 419 Pfam Rhodanese-like domain 196 294 IPR001763 -
Gso5g2123 419 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 164 316 IPR036873 -
Gso5g2123 419 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 72 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2123 Gso-Chr5 44152575 44163797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2123 74 412 Sulfurtransferasese or Rhodanese AT1G17850 62.943 2.08e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2123 - - gmx:100814358 843.573